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- W2950709586 abstract "Shapes of interacting RNA complexes are studied using a filtration via their topological genus. A shape of an RNA complex is obtained by (iteratively) collapsing stacks and eliminating hairpin loops. This shape-projection preserves the topological core of the RNA complex and for fixed topological genus there are only finitely many such shapes.Our main result is a new bijection that relates the shapes of RNA complexes with shapes of RNA structures.This allows to compute the shape polynomial of RNA complexes via the shape polynomial of RNA structures. We furthermore present a linear time uniform sampling algorithm for shapes of RNA complexes of fixed topological genus." @default.
- W2950709586 created "2019-06-27" @default.
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- W2950709586 date "2014-05-14" @default.
- W2950709586 modified "2023-09-27" @default.
- W2950709586 title "Shapes of interacting RNA complexes" @default.
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