FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2952324732> ?p ?o ?g. }

• W2952324732 abstract "Erinnyis ello granulovirus (ErelGV) is a betabaculovirus infecting caterpillars of the sphingid moth E. ello ello (cassava hornworm), an important pest of cassava crops (Manihot esculenta). In this study, the genome of seven field isolates of the virus ErelGV were deep sequenced and their inter- and intrapopulational sequence diversity were analyzed. No events of gene gain/loss or translocations were observed, and indels were mainly found within highly repetitive regions (direct repeats, drs). A naturally occurring isolate from Northern Brazil (Acre State, an Amazonian region) has shown to be the most diverse population, with a unique pattern of polymorphisms. Overall, non-synonymous substitutions were found all over the seven genomes, with no specific gathering of mutations on hotspot regions. Independently of their sizes, some ORFs have shown higher levels of non-synonymous changes than others. Non-core genes of known functions and structural genes were among the most diverse ones; and as expected, core genes were the least variable genes. We observed remarkable differences on diversity of paralogous genes, as in multiple copies of p10, fgf, and pep. Another important contrast on sequence diversity was found on genes encoding complex subunits and/or involved in the same biological processes, as late expression factors (lefs) and per os infectivity factors (pifs). Interestingly, several polymorphisms in coding regions lie on sequences encoding specific protein domains. By comparing and integrating information about inter- and intrapopulational diversity of viral isolates, we provide a detailed description on how evolution operates on field isolates of a betabaculovirus. Our results revealed that 35–41% of the SNPs of ErelGV lead to amino acid changes (non-synonymous substitutions). Some genes, especially non-core genes of unknown functions, tend to accumulate more mutations, while core genes evolve slowly and are more conserved. Additional studies would be necessary to understand the actual effects of such gene variations on viral infection and fitness." @default.
• W2952324732 created "2019-06-27" @default.
• W2952324732 creator A5012368380 @default.
• W2952324732 creator A5015355337 @default.
• W2952324732 creator A5023133311 @default.
• W2952324732 creator A5028711141 @default.
• W2952324732 creator A5046890674 @default.
• W2952324732 creator A5063147615 @default.
• W2952324732 date "2018-09-24" @default.
• W2952324732 modified "2023-10-16" @default.
• W2952324732 title "Genome-wide diversity in temporal and regional populations of the betabaculovirus Erinnyis ello granulovirus (ErelGV)" @default.
• W2952324732 cites W113427216 @default.
• W2952324732 cites W1565205712 @default.
• W2952324732 cites W1571245828 @default.
• W2952324732 cites W1579856010 @default.
• W2952324732 cites W18066535 @default.
• W2952324732 cites W1964019524 @default.
• W2952324732 cites W1970594919 @default.
• W2952324732 cites W1990076951 @default.
• W2952324732 cites W2001440214 @default.
• W2952324732 cites W2005418827 @default.
• W2952324732 cites W2040232873 @default.
• W2952324732 cites W2047499692 @default.
• W2952324732 cites W2054013721 @default.
• W2952324732 cites W2068160632 @default.
• W2952324732 cites W2070388580 @default.
• W2952324732 cites W2092138588 @default.
• W2952324732 cites W2106784857 @default.
• W2952324732 cites W2108982334 @default.
• W2952324732 cites W2112269135 @default.
• W2952324732 cites W2123372646 @default.
• W2952324732 cites W2127774996 @default.
• W2952324732 cites W2128880918 @default.
• W2952324732 cites W2130966777 @default.
• W2952324732 cites W2139134537 @default.
• W2952324732 cites W2140836172 @default.
• W2952324732 cites W2148686896 @default.
• W2952324732 cites W2150171818 @default.
• W2952324732 cites W2153900790 @default.
• W2952324732 cites W2158674380 @default.
• W2952324732 cites W2158804744 @default.
• W2952324732 cites W2164848774 @default.
• W2952324732 cites W2166323488 @default.
• W2952324732 cites W2173345606 @default.
• W2952324732 cites W2325549844 @default.
• W2952324732 cites W2398128862 @default.
• W2952324732 cites W2402394434 @default.
• W2952324732 cites W2418137015 @default.
• W2952324732 cites W2507345822 @default.
• W2952324732 cites W2564659355 @default.
• W2952324732 cites W2578328098 @default.
• W2952324732 cites W2739999456 @default.
• W2952324732 doi "https://doi.org/10.1186/s12864-018-5070-6" @default.
• W2952324732 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6154946" @default.
• W2952324732 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30249206" @default.
• W2952324732 hasPublicationYear "2018" @default.
• W2952324732 type Work @default.
• W2952324732 sameAs 2952324732 @default.
• W2952324732 citedByCount "10" @default.
• W2952324732 countsByYear W29523247322019 @default.
• W2952324732 countsByYear W29523247322020 @default.
• W2952324732 countsByYear W29523247322021 @default.
• W2952324732 countsByYear W29523247322022 @default.
• W2952324732 crossrefType "journal-article" @default.
• W2952324732 hasAuthorship W2952324732A5012368380 @default.
• W2952324732 hasAuthorship W2952324732A5015355337 @default.
• W2952324732 hasAuthorship W2952324732A5023133311 @default.
• W2952324732 hasAuthorship W2952324732A5028711141 @default.
• W2952324732 hasAuthorship W2952324732A5046890674 @default.
• W2952324732 hasAuthorship W2952324732A5063147615 @default.
• W2952324732 hasBestOaLocation W29523247321 @default.
• W2952324732 hasConcept C104317684 @default.
• W2952324732 hasConcept C119054055 @default.
• W2952324732 hasConcept C135763542 @default.
• W2952324732 hasConcept C141231307 @default.
• W2952324732 hasConcept C144024400 @default.
• W2952324732 hasConcept C149923435 @default.
• W2952324732 hasConcept C153209595 @default.
• W2952324732 hasConcept C167625842 @default.
• W2952324732 hasConcept C174600577 @default.
• W2952324732 hasConcept C2780530800 @default.
• W2952324732 hasConcept C2908647359 @default.
• W2952324732 hasConcept C47289529 @default.
• W2952324732 hasConcept C54355233 @default.
• W2952324732 hasConcept C78458016 @default.
• W2952324732 hasConcept C81977670 @default.
• W2952324732 hasConcept C86803240 @default.
• W2952324732 hasConceptScore W2952324732C104317684 @default.
• W2952324732 hasConceptScore W2952324732C119054055 @default.
• W2952324732 hasConceptScore W2952324732C135763542 @default.
• W2952324732 hasConceptScore W2952324732C141231307 @default.
• W2952324732 hasConceptScore W2952324732C144024400 @default.
• W2952324732 hasConceptScore W2952324732C149923435 @default.
• W2952324732 hasConceptScore W2952324732C153209595 @default.
• W2952324732 hasConceptScore W2952324732C167625842 @default.
• W2952324732 hasConceptScore W2952324732C174600577 @default.
• W2952324732 hasConceptScore W2952324732C2780530800 @default.
• W2952324732 hasConceptScore W2952324732C2908647359 @default.
• W2952324732 hasConceptScore W2952324732C47289529 @default.
• W2952324732 hasConceptScore W2952324732C54355233 @default.

• next