Matches in SemOpenAlex for { <https://semopenalex.org/work/W2952649401> ?p ?o ?g. }
Showing items 1 to 77 of
77
with 100 items per page.
- W2952649401 abstract "Rule-based modeling languages, such as the Kappa and BioNetGen languages (BNGL), are powerful frameworks for modeling the dynamics of complex biochemical reaction networks. Each language is distributed with a distinct software suite and modelers may wish to take advantage of both toolsets. This paper introduces a practical application called TRuML that translates models written in either Kappa or BNGL into the other language. While similar in many respects, key differences between the two languages makes translation sufficiently complex that automation becomes a useful tool. TRuML accommodates the languages' complexities and produces a semantically equivalent model in the alternate language of the input model when possible and an approximate model in certain other cases. Here, we discuss a number of these complexities and provide examples of equivalent models in both Kappa and BNGL." @default.
- W2952649401 created "2019-06-27" @default.
- W2952649401 creator A5016126519 @default.
- W2952649401 creator A5057558587 @default.
- W2952649401 date "2017-08-20" @default.
- W2952649401 modified "2023-09-27" @default.
- W2952649401 title "TRuML" @default.
- W2952649401 cites W1563071114 @default.
- W2952649401 cites W1986649132 @default.
- W2952649401 cites W2006466539 @default.
- W2952649401 cites W2027857026 @default.
- W2952649401 cites W2097240335 @default.
- W2952649401 cites W2121490181 @default.
- W2952649401 cites W2167154952 @default.
- W2952649401 cites W2175715045 @default.
- W2952649401 cites W2532622426 @default.
- W2952649401 doi "https://doi.org/10.1145/3107411.3107471" @default.
- W2952649401 hasPublicationYear "2017" @default.
- W2952649401 type Work @default.
- W2952649401 sameAs 2952649401 @default.
- W2952649401 citedByCount "6" @default.
- W2952649401 countsByYear W29526494012018 @default.
- W2952649401 countsByYear W29526494012019 @default.
- W2952649401 countsByYear W29526494012022 @default.
- W2952649401 crossrefType "proceedings-article" @default.
- W2952649401 hasAuthorship W2952649401A5016126519 @default.
- W2952649401 hasAuthorship W2952649401A5057558587 @default.
- W2952649401 hasConcept C115901376 @default.
- W2952649401 hasConcept C115903868 @default.
- W2952649401 hasConcept C127413603 @default.
- W2952649401 hasConcept C135257023 @default.
- W2952649401 hasConcept C154945302 @default.
- W2952649401 hasConcept C166957645 @default.
- W2952649401 hasConcept C179603123 @default.
- W2952649401 hasConcept C199360897 @default.
- W2952649401 hasConcept C26517878 @default.
- W2952649401 hasConcept C2777904410 @default.
- W2952649401 hasConcept C38652104 @default.
- W2952649401 hasConcept C41008148 @default.
- W2952649401 hasConcept C78519656 @default.
- W2952649401 hasConcept C79581498 @default.
- W2952649401 hasConcept C80444323 @default.
- W2952649401 hasConcept C95457728 @default.
- W2952649401 hasConceptScore W2952649401C115901376 @default.
- W2952649401 hasConceptScore W2952649401C115903868 @default.
- W2952649401 hasConceptScore W2952649401C127413603 @default.
- W2952649401 hasConceptScore W2952649401C135257023 @default.
- W2952649401 hasConceptScore W2952649401C154945302 @default.
- W2952649401 hasConceptScore W2952649401C166957645 @default.
- W2952649401 hasConceptScore W2952649401C179603123 @default.
- W2952649401 hasConceptScore W2952649401C199360897 @default.
- W2952649401 hasConceptScore W2952649401C26517878 @default.
- W2952649401 hasConceptScore W2952649401C2777904410 @default.
- W2952649401 hasConceptScore W2952649401C38652104 @default.
- W2952649401 hasConceptScore W2952649401C41008148 @default.
- W2952649401 hasConceptScore W2952649401C78519656 @default.
- W2952649401 hasConceptScore W2952649401C79581498 @default.
- W2952649401 hasConceptScore W2952649401C80444323 @default.
- W2952649401 hasConceptScore W2952649401C95457728 @default.
- W2952649401 hasLocation W29526494011 @default.
- W2952649401 hasLocation W29526494012 @default.
- W2952649401 hasOpenAccess W2952649401 @default.
- W2952649401 hasPrimaryLocation W29526494011 @default.
- W2952649401 hasRelatedWork W146741592 @default.
- W2952649401 hasRelatedWork W1594586966 @default.
- W2952649401 hasRelatedWork W1979247190 @default.
- W2952649401 hasRelatedWork W2104401375 @default.
- W2952649401 hasRelatedWork W2120119341 @default.
- W2952649401 hasRelatedWork W2125131497 @default.
- W2952649401 hasRelatedWork W2170963739 @default.
- W2952649401 hasRelatedWork W4245713008 @default.
- W2952649401 hasRelatedWork W4248736635 @default.
- W2952649401 hasRelatedWork W4294583777 @default.
- W2952649401 isParatext "false" @default.
- W2952649401 isRetracted "false" @default.
- W2952649401 magId "2952649401" @default.
- W2952649401 workType "article" @default.