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• W2952708922 abstract "We present Ginkgo (http://qb.cshl.edu/ginkgo), a user-friendly, open-source web platform for the analysis of single-cell copy-number variations (CNVs). Ginkgo automatically constructs copy-number profiles of cells from mapped reads and constructs phylogenetic trees of related cells. We validated Ginkgo by reproducing the results of five major studies. After comparing three commonly used single-cell amplification techniques, we concluded that degenerate oligonucleotide-primed PCR is the most consistent for CNV analysis." @default.
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• W2952708922 date "2015-09-07" @default.
• W2952708922 modified "2023-10-16" @default.
• W2952708922 title "Interactive analysis and assessment of single-cell copy-number variations" @default.
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• W2952708922 doi "https://doi.org/10.1038/nmeth.3578" @default.
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