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- W2953076768 abstract "It has been proven that the accessibility of the target sites has a critical influence for miRNA and siRNA. In this paper, we present a program, rip2.0, not only the energetically most favorable targets site based on the hybrid-probability, but also a statistical sampling structure to illustrate the statistical characterization and representation of the Boltzmann ensemble of RNA-RNA interaction structures. The outputs are retrieved via backtracing an improved dynamic programming solution for the partition function based on the approach of Huang et al. (Bioinformatics). The $O(N^6)$ time and $O(N^4)$ space algorithm is implemented in C (available from url{this http URL})" @default.
- W2953076768 created "2019-06-27" @default.
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- W2953076768 date "2009-08-05" @default.
- W2953076768 modified "2023-09-27" @default.
- W2953076768 title "Target prediction and a statistical sampling algorithm for RNA-RNA interaction" @default.
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- W2953076768 hasPublicationYear "2009" @default.
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