FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2965142009> ?p ?o ?g. }

• W2965142009 endingPage "17" @default.
• W2965142009 startingPage "1" @default.
• W2965142009 abstract "The complete chloroplast genome of J . flava , an endangered medicinal plant in Saudi Arabia, was sequenced and compared with cp genome of three Acanthaceae species to characterize the cp genome, identify SSRs, and also detect variation among the cp genomes of the sampled Acanthaceae. NOVOPlasty was used to assemble the complete chloroplast genome from the whole genome data. The cp genome of J . flava was 150, 888bp in length with GC content of 38.2%, and has a quadripartite structure; the genome harbors one pair of inverted repeat (IRa and IRb 25, 500bp each) separated by large single copy (LSC, 82, 995 bp) and small single copy (SSC, 16, 893 bp). There are 132 genes in the genome, which includes 80 protein coding genes, 30 tRNA, and 4 rRNA; 113 are unique while the remaining 19 are duplicated in IR regions. The repeat analysis indicates that the genome contained all types of repeats with palindromic occurring more frequently; the analysis also identified total number of 98 simple sequence repeats (SSR) of which majority are mononucleotides A/T and are found in the intergenic spacer. The comparative analysis with other cp genomes sampled indicated that the inverted repeat regions are conserved than the single copy regions and the noncoding regions show high rate of variation than the coding region. All the genomes have ndhF and ycf1 genes in the border junction of IRb and SSC. Sequence divergence analysis of the protein coding genes showed that seven genes ( petB, atpF, psaI, rpl32, rpl16, ycf1, and clpP ) are under positive selection. The phylogenetic analysis revealed that Justiceae is sister to Ruellieae. This study reported the first cp genome of the largest genus in Acanthaceae and provided resources for studying genetic diversity of J . flava as well as resolving phylogenetic relationships within the core Acanthaceae." @default.
• W2965142009 created "2019-08-13" @default.
• W2965142009 creator A5025419525 @default.
• W2965142009 creator A5039682393 @default.
• W2965142009 creator A5051465902 @default.
• W2965142009 creator A5078333029 @default.
• W2965142009 creator A5081137970 @default.
• W2965142009 date "2019-08-06" @default.
• W2965142009 modified "2023-10-16" @default.
• W2965142009 title "Complete Chloroplast Genome Sequence of<i> Justicia flava</i>: Genome Comparative Analysis and Phylogenetic Relationships among Acanthaceae" @default.
• W2965142009 cites W1502417695 @default.
• W2965142009 cites W1568479515 @default.
• W2965142009 cites W1966972227 @default.
• W2965142009 cites W1983903377 @default.
• W2965142009 cites W1989042412 @default.
• W2965142009 cites W1994827523 @default.
• W2965142009 cites W1996515220 @default.
• W2965142009 cites W1997432684 @default.
• W2965142009 cites W1999039602 @default.
• W2965142009 cites W2027448315 @default.
• W2965142009 cites W2029652193 @default.
• W2965142009 cites W2031679701 @default.
• W2965142009 cites W2033713984 @default.
• W2965142009 cites W2039446206 @default.
• W2965142009 cites W2042533249 @default.
• W2965142009 cites W2050139656 @default.
• W2965142009 cites W2060970547 @default.
• W2965142009 cites W2065161588 @default.
• W2965142009 cites W2065786627 @default.
• W2965142009 cites W2101157425 @default.
• W2965142009 cites W2119978671 @default.
• W2965142009 cites W2120611093 @default.
• W2965142009 cites W2121180999 @default.
• W2965142009 cites W2124281279 @default.
• W2965142009 cites W2124698016 @default.
• W2965142009 cites W2126962694 @default.
• W2965142009 cites W2133559537 @default.
• W2965142009 cites W2144322830 @default.
• W2965142009 cites W2146034172 @default.
• W2965142009 cites W2147096538 @default.
• W2965142009 cites W2148698435 @default.
• W2965142009 cites W2154845780 @default.
• W2965142009 cites W2156960913 @default.
• W2965142009 cites W2160378127 @default.
• W2965142009 cites W2165667637 @default.
• W2965142009 cites W2186095010 @default.
• W2965142009 cites W2265011897 @default.
• W2965142009 cites W2312730507 @default.
• W2965142009 cites W2316550929 @default.
• W2965142009 cites W2326949003 @default.
• W2965142009 cites W2522985576 @default.
• W2965142009 cites W2530199488 @default.
• W2965142009 cites W2535995078 @default.
• W2965142009 cites W2568721347 @default.
• W2965142009 cites W2582467652 @default.
• W2965142009 cites W2599769751 @default.
• W2965142009 cites W2747941154 @default.
• W2965142009 cites W2748772348 @default.
• W2965142009 cites W2753910085 @default.
• W2965142009 cites W2754831453 @default.
• W2965142009 cites W2766521485 @default.
• W2965142009 cites W2769115973 @default.
• W2965142009 cites W2790130491 @default.
• W2965142009 cites W2790341215 @default.
• W2965142009 cites W2792039347 @default.
• W2965142009 cites W2793200886 @default.
• W2965142009 cites W2886959390 @default.
• W2965142009 cites W2908681424 @default.
• W2965142009 cites W4231070980 @default.
• W2965142009 cites W4254036840 @default.
• W2965142009 doi "https://doi.org/10.1155/2019/4370258" @default.
• W2965142009 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6699374" @default.
• W2965142009 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31467890" @default.
• W2965142009 hasPublicationYear "2019" @default.
• W2965142009 type Work @default.
• W2965142009 sameAs 2965142009 @default.
• W2965142009 citedByCount "19" @default.
• W2965142009 countsByYear W29651420092020 @default.
• W2965142009 countsByYear W29651420092021 @default.
• W2965142009 countsByYear W29651420092022 @default.
• W2965142009 countsByYear W29651420092023 @default.
• W2965142009 crossrefType "journal-article" @default.
• W2965142009 hasAuthorship W2965142009A5025419525 @default.
• W2965142009 hasAuthorship W2965142009A5039682393 @default.
• W2965142009 hasAuthorship W2965142009A5051465902 @default.
• W2965142009 hasAuthorship W2965142009A5078333029 @default.
• W2965142009 hasAuthorship W2965142009A5081137970 @default.
• W2965142009 hasBestOaLocation W29651420091 @default.
• W2965142009 hasConcept C104317684 @default.
• W2965142009 hasConcept C141231307 @default.
• W2965142009 hasConcept C192953774 @default.
• W2965142009 hasConcept C193252679 @default.
• W2965142009 hasConcept C195139083 @default.
• W2965142009 hasConcept C24432333 @default.
• W2965142009 hasConcept C2777505162 @default.
• W2965142009 hasConcept C2779141871 @default.
• W2965142009 hasConcept C42251679 @default.
• W2965142009 hasConcept C48050816 @default.

• next