FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2972184044> ?p ?o ?g. }

• W2972184044 abstract "Photoperiodic flowering, a plant response to seasonal photoperiod changes in the control of reproductive transition, is an important agronomic trait that has been a central target of crop domestication and modern breeding programs. However, our understanding about the molecular mechanisms of photoperiodic flowering regulation in crop species is lagging behind. To better understand the regulatory gene networks controlling photoperiodic flowering of soybeans, we elucidated global gene expression patterns under different photoperiod regimes using the near isogenic lines (NILs) of maturity loci (E loci). Transcriptome signatures identified unique roles of the E loci in photoperiodic flowering and a set of genes controlled by these loci. To elucidate the regulatory gene networks underlying photoperiodic flowering regulation, we developed the network inference algorithmic package CausNet that integrates sparse linear regression and Granger causality heuristics, as well as Gaussian approximation of bootstrapping to provide reliability scores for predicted regulatory interactions. Using the transcriptome data, CausNet inferred regulatory interactions among soybean flowering genes. Comparison with literature provided several inferred regulatory interactions with empirical verification. We further confirmed the inferred regulatory roles of the flowering suppressors GmCOL1a and GmCOL1b using GmCOL1 RNAi transgenic soybean plants. Combinations of the alleles of GmCOL1 and the major maturity locus E1 demonstrated positive interaction between these genes, leading to enhanced suppression of flowering transition. Our work provides novel insights and testable hypotheses in the complex molecular mechanisms of photoperiodic flowering control in soybean and lays a framework for de novo prediction of biological networks controlling important agronomic traits in crops." @default.
• W2972184044 created "2019-09-12" @default.
• W2972184044 creator A5027214295 @default.
• W2972184044 creator A5027350575 @default.
• W2972184044 creator A5031824944 @default.
• W2972184044 creator A5045181694 @default.
• W2972184044 creator A5047760182 @default.
• W2972184044 creator A5058346905 @default.
• W2972184044 creator A5091066643 @default.
• W2972184044 date "2019-11-08" @default.
• W2972184044 modified "2023-10-16" @default.
• W2972184044 title "Transcriptome-Enabled Network Inference Revealed the GmCOL1 Feed-Forward Loop and Its Roles in Photoperiodic Flowering of Soybean" @default.
• W2972184044 cites W1971040306 @default.
• W2972184044 cites W2005370601 @default.
• W2972184044 cites W2017126312 @default.
• W2972184044 cites W2022971290 @default.
• W2972184044 cites W2026106014 @default.
• W2972184044 cites W2037158169 @default.
• W2972184044 cites W2038716712 @default.
• W2972184044 cites W2039034421 @default.
• W2972184044 cites W2050755635 @default.
• W2972184044 cites W2051198048 @default.
• W2972184044 cites W2056657640 @default.
• W2972184044 cites W2062553263 @default.
• W2972184044 cites W2066501197 @default.
• W2972184044 cites W2071903046 @default.
• W2972184044 cites W2099380913 @default.
• W2972184044 cites W2100305481 @default.
• W2972184044 cites W2108137105 @default.
• W2972184044 cites W2109110326 @default.
• W2972184044 cites W2122721828 @default.
• W2972184044 cites W2134680643 @default.
• W2972184044 cites W2140247457 @default.
• W2972184044 cites W2147231176 @default.
• W2972184044 cites W2153616282 @default.
• W2972184044 cites W2159402338 @default.
• W2972184044 cites W2159675211 @default.
• W2972184044 cites W2160533336 @default.
• W2972184044 cites W2162142896 @default.
• W2972184044 cites W2172094136 @default.
• W2972184044 cites W2245955542 @default.
• W2972184044 cites W2257817646 @default.
• W2972184044 cites W2401430778 @default.
• W2972184044 cites W242603898 @default.
• W2972184044 cites W2523226413 @default.
• W2972184044 cites W2535622305 @default.
• W2972184044 cites W2592421612 @default.
• W2972184044 cites W2603514654 @default.
• W2972184044 cites W2603716527 @default.
• W2972184044 cites W2609845159 @default.
• W2972184044 cites W2767468384 @default.
• W2972184044 doi "https://doi.org/10.3389/fpls.2019.01221" @default.
• W2972184044 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6856076" @default.
• W2972184044 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31787988" @default.
• W2972184044 hasPublicationYear "2019" @default.
• W2972184044 type Work @default.
• W2972184044 sameAs 2972184044 @default.
• W2972184044 citedByCount "20" @default.
• W2972184044 countsByYear W29721840442020 @default.
• W2972184044 countsByYear W29721840442021 @default.
• W2972184044 countsByYear W29721840442022 @default.
• W2972184044 countsByYear W29721840442023 @default.
• W2972184044 crossrefType "journal-article" @default.
• W2972184044 hasAuthorship W2972184044A5027214295 @default.
• W2972184044 hasAuthorship W2972184044A5027350575 @default.
• W2972184044 hasAuthorship W2972184044A5031824944 @default.
• W2972184044 hasAuthorship W2972184044A5045181694 @default.
• W2972184044 hasAuthorship W2972184044A5047760182 @default.
• W2972184044 hasAuthorship W2972184044A5058346905 @default.
• W2972184044 hasAuthorship W2972184044A5091066643 @default.
• W2972184044 hasBestOaLocation W29721840441 @default.
• W2972184044 hasConcept C104317684 @default.
• W2972184044 hasConcept C134387633 @default.
• W2972184044 hasConcept C150194340 @default.
• W2972184044 hasConcept C150903083 @default.
• W2972184044 hasConcept C162317418 @default.
• W2972184044 hasConcept C54355233 @default.
• W2972184044 hasConcept C55969652 @default.
• W2972184044 hasConcept C59822182 @default.
• W2972184044 hasConcept C67339327 @default.
• W2972184044 hasConcept C70721500 @default.
• W2972184044 hasConcept C78458016 @default.
• W2972184044 hasConcept C81941488 @default.
• W2972184044 hasConcept C84597430 @default.
• W2972184044 hasConcept C86803240 @default.
• W2972184044 hasConceptScore W2972184044C104317684 @default.
• W2972184044 hasConceptScore W2972184044C134387633 @default.
• W2972184044 hasConceptScore W2972184044C150194340 @default.
• W2972184044 hasConceptScore W2972184044C150903083 @default.
• W2972184044 hasConceptScore W2972184044C162317418 @default.
• W2972184044 hasConceptScore W2972184044C54355233 @default.
• W2972184044 hasConceptScore W2972184044C55969652 @default.
• W2972184044 hasConceptScore W2972184044C59822182 @default.
• W2972184044 hasConceptScore W2972184044C67339327 @default.
• W2972184044 hasConceptScore W2972184044C70721500 @default.
• W2972184044 hasConceptScore W2972184044C78458016 @default.
• W2972184044 hasConceptScore W2972184044C81941488 @default.
• W2972184044 hasConceptScore W2972184044C84597430 @default.
• W2972184044 hasConceptScore W2972184044C86803240 @default.
• W2972184044 hasLocation W29721840441 @default.

• next