FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2989884920> ?p ?o ?g. }

• W2989884920 endingPage "107169" @default.
• W2989884920 startingPage "107169" @default.
• W2989884920 abstract "Plant molecular breeding largely depends on the relationship between molecular markers and major traits. Herein, a total of 32,962 genomic simple sequence repeats (SSRs) were detected in the whole genome of chickpea with an average density of 94.93 SSRs/Mb. Chickpea chromosomes uniformity test indicated that the genomic SSRs (gSSRs) were steadily distributed across the genome. Moreover, 48,667 transcriptome sequences were analyzed and 1949 SSR-containing transcript assembly contigs (TACs) were identified. The analysis showed that di- and trinucleotide SSRs were the most frequent SSR motifs within the transcriptome sequences. Among them, AT and TTA and AG and TTC motifs within the transcriptome showed the highest frequencies among di- and trinucleotide repeat motifs, respectively. The SSRs-containing TACs were compared to the GenBank non-redundant database using BLASTX, and subsequently, gene ontology (GO) analysis was performed using QuickGO browser to reduce complexity and highlight biological processes associated with the SSRs-containing TACs. The identified SSRs-containing TACs were categorized into 35 enriched functional-related gene group. The mapping of characterized SSRs-containing TACs onto chickpea chromosomes was performed using BLASTN. The mapping result showed that, a total of 1798 SSRs-containing TACs were mapped onto the chickpea genome. Based on the functional analysis result, 249 and 242 of the mapped SSRs-containing TACs were found in the genes encoding for putative stress-related proteins and transcription factors, respectively. The results presented here can be applied to improve and speed up the chickpea breeding programs." @default.
• W2989884920 created "2019-12-05" @default.
• W2989884920 creator A5007712698 @default.
• W2989884920 creator A5017994386 @default.
• W2989884920 creator A5041689251 @default.
• W2989884920 creator A5063742560 @default.
• W2989884920 creator A5084727681 @default.
• W2989884920 date "2020-02-01" @default.
• W2989884920 modified "2023-10-17" @default.
• W2989884920 title "Comprehensive functional analysis and mapping of SSR markers in the chickpea genome (Cicer arietinum L.)" @default.
• W2989884920 cites W1776649470 @default.
• W2989884920 cites W1910803177 @default.
• W2989884920 cites W1969056924 @default.
• W2989884920 cites W1973424926 @default.
• W2989884920 cites W1974670959 @default.
• W2989884920 cites W1980195730 @default.
• W2989884920 cites W1983878717 @default.
• W2989884920 cites W1985128320 @default.
• W2989884920 cites W2000423960 @default.
• W2989884920 cites W2004127760 @default.
• W2989884920 cites W2005458361 @default.
• W2989884920 cites W2026542535 @default.
• W2989884920 cites W2033086214 @default.
• W2989884920 cites W2033885428 @default.
• W2989884920 cites W2037729125 @default.
• W2989884920 cites W2038574100 @default.
• W2989884920 cites W2039705689 @default.
• W2989884920 cites W2041345883 @default.
• W2989884920 cites W2052194774 @default.
• W2989884920 cites W2069346156 @default.
• W2989884920 cites W2076141037 @default.
• W2989884920 cites W2079933229 @default.
• W2989884920 cites W2086928624 @default.
• W2989884920 cites W2096053556 @default.
• W2989884920 cites W2096590190 @default.
• W2989884920 cites W2096951150 @default.
• W2989884920 cites W2104043339 @default.
• W2989884920 cites W2109735436 @default.
• W2989884920 cites W2115743856 @default.
• W2989884920 cites W2119257355 @default.
• W2989884920 cites W2122949061 @default.
• W2989884920 cites W2135222648 @default.
• W2989884920 cites W2135459657 @default.
• W2989884920 cites W2135556068 @default.
• W2989884920 cites W2146902355 @default.
• W2989884920 cites W2152635695 @default.
• W2989884920 cites W2157770995 @default.
• W2989884920 cites W2158148243 @default.
• W2989884920 cites W2161455016 @default.
• W2989884920 cites W2169115409 @default.
• W2989884920 cites W2170163275 @default.
• W2989884920 cites W2171724922 @default.
• W2989884920 cites W2171787842 @default.
• W2989884920 doi "https://doi.org/10.1016/j.compbiolchem.2019.107169" @default.
• W2989884920 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31812779" @default.
• W2989884920 hasPublicationYear "2020" @default.
• W2989884920 type Work @default.
• W2989884920 sameAs 2989884920 @default.
• W2989884920 citedByCount "6" @default.
• W2989884920 countsByYear W29898849202020 @default.
• W2989884920 countsByYear W29898849202021 @default.
• W2989884920 countsByYear W29898849202022 @default.
• W2989884920 crossrefType "journal-article" @default.
• W2989884920 hasAuthorship W2989884920A5007712698 @default.
• W2989884920 hasAuthorship W2989884920A5017994386 @default.
• W2989884920 hasAuthorship W2989884920A5041689251 @default.
• W2989884920 hasAuthorship W2989884920A5063742560 @default.
• W2989884920 hasAuthorship W2989884920A5084727681 @default.
• W2989884920 hasConcept C104317684 @default.
• W2989884920 hasConcept C141231307 @default.
• W2989884920 hasConcept C150194340 @default.
• W2989884920 hasConcept C162317418 @default.
• W2989884920 hasConcept C180754005 @default.
• W2989884920 hasConcept C54355233 @default.
• W2989884920 hasConcept C59582021 @default.
• W2989884920 hasConcept C61320498 @default.
• W2989884920 hasConcept C70721500 @default.
• W2989884920 hasConcept C86803240 @default.
• W2989884920 hasConceptScore W2989884920C104317684 @default.
• W2989884920 hasConceptScore W2989884920C141231307 @default.
• W2989884920 hasConceptScore W2989884920C150194340 @default.
• W2989884920 hasConceptScore W2989884920C162317418 @default.
• W2989884920 hasConceptScore W2989884920C180754005 @default.
• W2989884920 hasConceptScore W2989884920C54355233 @default.
• W2989884920 hasConceptScore W2989884920C59582021 @default.
• W2989884920 hasConceptScore W2989884920C61320498 @default.
• W2989884920 hasConceptScore W2989884920C70721500 @default.
• W2989884920 hasConceptScore W2989884920C86803240 @default.
• W2989884920 hasLocation W29898849201 @default.
• W2989884920 hasLocation W29898849202 @default.
• W2989884920 hasOpenAccess W2989884920 @default.
• W2989884920 hasPrimaryLocation W29898849201 @default.
• W2989884920 hasRelatedWork W1965617840 @default.
• W2989884920 hasRelatedWork W1966682300 @default.
• W2989884920 hasRelatedWork W2039973158 @default.
• W2989884920 hasRelatedWork W2049364822 @default.
• W2989884920 hasRelatedWork W2079978534 @default.
• W2989884920 hasRelatedWork W2123801404 @default.

• next