FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2993253223> ?p ?o ?g. }

• W2993253223 abstract "Abstract Background Integrated analysis that uses multiple sample gene expression data measured under the same stress can detect stress response genes more accurately than analysis of individual sample data. However, the integrated analysis is challenging since experimental conditions (strength of stress and the number of time points) are heterogeneous across multiple samples. Results HTRgene is a computational method to perform the integrated analysis of multiple heterogeneous time-series data measured under the same stress condition. The goal of HTRgene is to identify “response order preserving DEGs” that are defined as genes not only which are differentially expressed but also whose response order is preserved across multiple samples. The utility of HTRgene was demonstrated using 28 and 24 time-series sample gene expression data measured under cold and heat stress in Arabidopsis. HTRgene analysis successfully reproduced known biological mechanisms of cold and heat stress in Arabidopsis. Also, HTRgene showed higher accuracy in detecting the documented stress response genes than existing tools. Conclusions HTRgene, a method to find the ordering of response time of genes that are commonly observed among multiple time-series samples, successfully integrated multiple heterogeneous time-series gene expression datasets. It can be applied to many research problems related to the integration of time series data analysis." @default.
• W2993253223 created "2019-12-13" @default.
• W2993253223 creator A5004249952 @default.
• W2993253223 creator A5030762704 @default.
• W2993253223 creator A5080797535 @default.
• W2993253223 creator A5086676366 @default.
• W2993253223 creator A5090194343 @default.
• W2993253223 creator A5090632282 @default.
• W2993253223 date "2019-12-01" @default.
• W2993253223 modified "2023-10-18" @default.
• W2993253223 title "HTRgene: a computational method to perform the integrated analysis of multiple heterogeneous time-series data: case analysis of cold and heat stress response signaling genes in Arabidopsis" @default.
• W2993253223 cites W1549647993 @default.
• W2993253223 cites W1901919421 @default.
• W2993253223 cites W1941634103 @default.
• W2993253223 cites W1964904043 @default.
• W2993253223 cites W1977608152 @default.
• W2993253223 cites W1981509058 @default.
• W2993253223 cites W1983250864 @default.
• W2993253223 cites W1985600167 @default.
• W2993253223 cites W1989334750 @default.
• W2993253223 cites W2003216096 @default.
• W2993253223 cites W2005102172 @default.
• W2993253223 cites W2014083300 @default.
• W2993253223 cites W2017218227 @default.
• W2993253223 cites W2019312328 @default.
• W2993253223 cites W2070040136 @default.
• W2993253223 cites W2087596485 @default.
• W2993253223 cites W2091476601 @default.
• W2993253223 cites W2104955343 @default.
• W2993253223 cites W2109202455 @default.
• W2993253223 cites W2109659931 @default.
• W2993253223 cites W2114104545 @default.
• W2993253223 cites W2116634113 @default.
• W2993253223 cites W2118258530 @default.
• W2993253223 cites W2121187620 @default.
• W2993253223 cites W2123073741 @default.
• W2993253223 cites W2124956970 @default.
• W2993253223 cites W2135230723 @default.
• W2993253223 cites W2141899181 @default.
• W2993253223 cites W2142433339 @default.
• W2993253223 cites W2146512944 @default.
• W2993253223 cites W2152239989 @default.
• W2993253223 cites W2159827609 @default.
• W2993253223 cites W2161640123 @default.
• W2993253223 cites W2165891030 @default.
• W2993253223 cites W2166491951 @default.
• W2993253223 cites W2171419763 @default.
• W2993253223 cites W2477620451 @default.
• W2993253223 cites W2521298391 @default.
• W2993253223 cites W2527745490 @default.
• W2993253223 cites W2527891094 @default.
• W2993253223 cites W2532141416 @default.
• W2993253223 cites W2555020059 @default.
• W2993253223 cites W2579728701 @default.
• W2993253223 cites W2584070506 @default.
• W2993253223 cites W2599259619 @default.
• W2993253223 cites W2610303468 @default.
• W2993253223 doi "https://doi.org/10.1186/s12859-019-3072-2" @default.
• W2993253223 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6886170" @default.
• W2993253223 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31787073" @default.
• W2993253223 hasPublicationYear "2019" @default.
• W2993253223 type Work @default.
• W2993253223 sameAs 2993253223 @default.
• W2993253223 citedByCount "3" @default.
• W2993253223 countsByYear W29932532232019 @default.
• W2993253223 countsByYear W29932532232020 @default.
• W2993253223 countsByYear W29932532232022 @default.
• W2993253223 crossrefType "journal-article" @default.
• W2993253223 hasAuthorship W2993253223A5004249952 @default.
• W2993253223 hasAuthorship W2993253223A5030762704 @default.
• W2993253223 hasAuthorship W2993253223A5080797535 @default.
• W2993253223 hasAuthorship W2993253223A5086676366 @default.
• W2993253223 hasAuthorship W2993253223A5090194343 @default.
• W2993253223 hasAuthorship W2993253223A5090632282 @default.
• W2993253223 hasBestOaLocation W29932532231 @default.
• W2993253223 hasConcept C104317684 @default.
• W2993253223 hasConcept C105795698 @default.
• W2993253223 hasConcept C119857082 @default.
• W2993253223 hasConcept C129848803 @default.
• W2993253223 hasConcept C140793950 @default.
• W2993253223 hasConcept C143065580 @default.
• W2993253223 hasConcept C143724316 @default.
• W2993253223 hasConcept C150194340 @default.
• W2993253223 hasConcept C151406439 @default.
• W2993253223 hasConcept C151730666 @default.
• W2993253223 hasConcept C185592680 @default.
• W2993253223 hasConcept C198531522 @default.
• W2993253223 hasConcept C2779491563 @default.
• W2993253223 hasConcept C2987418964 @default.
• W2993253223 hasConcept C33923547 @default.
• W2993253223 hasConcept C41008148 @default.
• W2993253223 hasConcept C43617362 @default.
• W2993253223 hasConcept C54355233 @default.
• W2993253223 hasConcept C60644358 @default.
• W2993253223 hasConcept C70721500 @default.
• W2993253223 hasConcept C86803240 @default.
• W2993253223 hasConcept C95371953 @default.
• W2993253223 hasConceptScore W2993253223C104317684 @default.
• W2993253223 hasConceptScore W2993253223C105795698 @default.
• W2993253223 hasConceptScore W2993253223C119857082 @default.

• next