FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3000147686> ?p ?o ?g. }

• W3000147686 abstract "Abstract Avocado ( Persea americana Mill.), macadamia ( Macadamia integrifolia L.) and mango ( Mangifera indica L.) are important subtropical tree species grown for their edible fruits and nuts. Despite their commercial and nutritional importance, the genomic information for these species is largely lacking. Here we report the generation of avocado, macadamia and mango transcriptome assemblies from pooled leaf, stem, bud, root, floral and fruit/nut tissue. Using normalized cDNA libraries, we generated comprehensive RNA-Seq datasets from which we assembled 63420, 78871 and 82198 unigenes of avocado, macadamia and mango, respectively using a combination of de novo transcriptome assembly and redundancy reduction. These unigenes were functionally annotated using Basic Local Alignment Search Tool (BLAST) to query the Universal Protein Resource Knowledgebase (UniProtKB). A workflow encompassing RNA extraction, library preparation, transcriptome assembly, redundancy reduction, assembly validation and annotation is provided. This study provides avocado, macadamia and mango transcriptome and annotation data, which is valuable for gene discovery and gene expression profiling experiments as well as ongoing and future genome annotation and marker development applications." @default.
• W3000147686 created "2020-01-23" @default.
• W3000147686 creator A5019675388 @default.
• W3000147686 creator A5020471262 @default.
• W3000147686 creator A5021798737 @default.
• W3000147686 creator A5062313346 @default.
• W3000147686 date "2020-01-08" @default.
• W3000147686 modified "2023-10-14" @default.
• W3000147686 title "De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango" @default.
• W3000147686 cites W1787588349 @default.
• W3000147686 cites W1977433219 @default.
• W3000147686 cites W2008033406 @default.
• W3000147686 cites W2011657487 @default.
• W3000147686 cites W2035660115 @default.
• W3000147686 cites W2041394791 @default.
• W3000147686 cites W2055043387 @default.
• W3000147686 cites W2059565715 @default.
• W3000147686 cites W2060764015 @default.
• W3000147686 cites W2126419817 @default.
• W3000147686 cites W2129521425 @default.
• W3000147686 cites W2131271579 @default.
• W3000147686 cites W2142678478 @default.
• W3000147686 cites W2155628349 @default.
• W3000147686 cites W2170747616 @default.
• W3000147686 cites W2173521202 @default.
• W3000147686 cites W2432815617 @default.
• W3000147686 cites W2461835360 @default.
• W3000147686 cites W2480080127 @default.
• W3000147686 cites W2551820791 @default.
• W3000147686 cites W2559011563 @default.
• W3000147686 cites W2791771577 @default.
• W3000147686 cites W2800344798 @default.
• W3000147686 cites W2899095268 @default.
• W3000147686 cites W2949013033 @default.
• W3000147686 cites W2951257985 @default.
• W3000147686 cites W2964849163 @default.
• W3000147686 cites W2966403721 @default.
• W3000147686 cites W3021772666 @default.
• W3000147686 cites W3136918052 @default.
• W3000147686 cites W807286369 @default.
• W3000147686 cites W1500282812 @default.
• W3000147686 doi "https://doi.org/10.1038/s41597-019-0350-9" @default.
• W3000147686 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6949230" @default.
• W3000147686 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31913298" @default.
• W3000147686 hasPublicationYear "2020" @default.
• W3000147686 type Work @default.
• W3000147686 sameAs 3000147686 @default.
• W3000147686 citedByCount "19" @default.
• W3000147686 countsByYear W30001476862020 @default.
• W3000147686 countsByYear W30001476862021 @default.
• W3000147686 countsByYear W30001476862022 @default.
• W3000147686 countsByYear W30001476862023 @default.
• W3000147686 crossrefType "journal-article" @default.
• W3000147686 hasAuthorship W3000147686A5019675388 @default.
• W3000147686 hasAuthorship W3000147686A5020471262 @default.
• W3000147686 hasAuthorship W3000147686A5021798737 @default.
• W3000147686 hasAuthorship W3000147686A5062313346 @default.
• W3000147686 hasBestOaLocation W30001476861 @default.
• W3000147686 hasConcept C104317684 @default.
• W3000147686 hasConcept C107397762 @default.
• W3000147686 hasConcept C150194340 @default.
• W3000147686 hasConcept C162317418 @default.
• W3000147686 hasConcept C187882448 @default.
• W3000147686 hasConcept C189482833 @default.
• W3000147686 hasConcept C18949551 @default.
• W3000147686 hasConcept C2777092684 @default.
• W3000147686 hasConcept C2781429666 @default.
• W3000147686 hasConcept C50489715 @default.
• W3000147686 hasConcept C54355233 @default.
• W3000147686 hasConcept C59822182 @default.
• W3000147686 hasConcept C86803240 @default.
• W3000147686 hasConceptScore W3000147686C104317684 @default.
• W3000147686 hasConceptScore W3000147686C107397762 @default.
• W3000147686 hasConceptScore W3000147686C150194340 @default.
• W3000147686 hasConceptScore W3000147686C162317418 @default.
• W3000147686 hasConceptScore W3000147686C187882448 @default.
• W3000147686 hasConceptScore W3000147686C189482833 @default.
• W3000147686 hasConceptScore W3000147686C18949551 @default.
• W3000147686 hasConceptScore W3000147686C2777092684 @default.
• W3000147686 hasConceptScore W3000147686C2781429666 @default.
• W3000147686 hasConceptScore W3000147686C50489715 @default.
• W3000147686 hasConceptScore W3000147686C54355233 @default.
• W3000147686 hasConceptScore W3000147686C59822182 @default.
• W3000147686 hasConceptScore W3000147686C86803240 @default.
• W3000147686 hasIssue "1" @default.
• W3000147686 hasLocation W30001476861 @default.
• W3000147686 hasLocation W30001476862 @default.
• W3000147686 hasLocation W30001476863 @default.
• W3000147686 hasOpenAccess W3000147686 @default.
• W3000147686 hasPrimaryLocation W30001476861 @default.
• W3000147686 hasRelatedWork W2021791492 @default.
• W3000147686 hasRelatedWork W2049364822 @default.
• W3000147686 hasRelatedWork W2127963635 @default.
• W3000147686 hasRelatedWork W2341129813 @default.
• W3000147686 hasRelatedWork W2560271494 @default.
• W3000147686 hasRelatedWork W3000147686 @default.
• W3000147686 hasRelatedWork W3016544360 @default.
• W3000147686 hasRelatedWork W3157557088 @default.
• W3000147686 hasRelatedWork W4206729893 @default.
• W3000147686 hasRelatedWork W4247298663 @default.

• next