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- W3005935000 endingPage "e8540" @default.
- W3005935000 startingPage "e8540" @default.
- W3005935000 abstract "Pitayas (Hylocereus spp.) is an attractive, highly nutritious and commercially valuable tropical fruit. However, low-temperature damage limits crop production. Genome of pitaya has not been sequenced yet. In this study, we sequenced the transcriptome of pitaya as the reference and further investigated the proteome under low temperature. By RNAseq technique, approximately 25.3 million reads were obtained, and further trimmed and assembled into 81,252 unigene sequences. The unigenes were searched against UniProt, NR and COGs at NCBI, Pfam, InterPro and Kyoto Encyclopedia of Genes and Genomes (KEGG) database, and 57,905 unigenes were retrieved annotations. Among them, 44,337 coding sequences were predicted by Trandecoder (v2.0.1), which served as the reference database for label-free proteomic analysis study of pitaya. Here, we identified 116 Differentially Abundant Proteins (DAPs) associated with the cold stress in pitaya, of which 18 proteins were up-regulated and 98 proteins were down-regulated. KEGG analysis and other results showed that these DAPs mainly related to chloroplasts and mitochondria metabolism. In summary, chloroplasts and mitochondria metabolism-related proteins may play an important role in response to cold stress in pitayas." @default.
- W3005935000 created "2020-02-24" @default.
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- W3005935000 date "2020-02-11" @default.
- W3005935000 modified "2023-10-14" @default.
- W3005935000 title "Proteogenomic analysis of pitaya reveals cold stress-related molecular signature" @default.
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- W3005935000 cites W1986954233 @default.
- W3005935000 cites W1998767819 @default.
- W3005935000 cites W1999492869 @default.
- W3005935000 cites W2002235500 @default.
- W3005935000 cites W2004957811 @default.
- W3005935000 cites W2007671898 @default.
- W3005935000 cites W2021681068 @default.
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- W3005935000 cites W2024793892 @default.
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- W3005935000 cites W2037268909 @default.
- W3005935000 cites W2039657997 @default.
- W3005935000 cites W2044635013 @default.
- W3005935000 cites W2058650422 @default.
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- W3005935000 doi "https://doi.org/10.7717/peerj.8540" @default.
- W3005935000 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7020823" @default.
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