FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3010071578> ?p ?o ?g. }

• W3010071578 abstract "Abstract Gene set enrichment analysis has become one of the most frequently used applications in molecular biology research. Originally developed for gene sets, the same statistical principles are now available for all omics types. In 2016, we published the miRNA enrichment analysis and annotation tool (miEAA) for human precursor and mature miRNAs. Here, we present miEAA 2.0, supporting miRNA input from Homo sapiens, Mus musculus , and Rattus norvegicus . To facilitate inclusion of miEAA in workflow systems, we implemented an Application Programming Interface (API). Users can perform miRNA set enrichment analysis using either the web-interface, a dedicated Python package, or custom remote clients. Moreover, the number of category sets was raised by an order of magnitude. We implemented novel categories like annotation confidence level or localisation in biological compartments. In combination with the miR-Base miRNA-version and miRNA-to-precursor converters, miEAA supports research settings where older releases of miRBase are in use. The web server also offers novel comprehensive visualisations such as heatmaps and running sum curves with background distributions. Lastly, additional methods to correct for multiple hypothesis testing were implemented. We demonstrate the new features using case studies for human kidney cancer and mouse samples. The tool is freely accessible at: https://www.ccb.uni-saarland.de/mieaa2 ." @default.
• W3010071578 created "2020-03-13" @default.
• W3010071578 creator A5015677497 @default.
• W3010071578 creator A5020280119 @default.
• W3010071578 creator A5054514348 @default.
• W3010071578 creator A5058152494 @default.
• W3010071578 creator A5066723446 @default.
• W3010071578 creator A5075631508 @default.
• W3010071578 creator A5084504324 @default.
• W3010071578 date "2020-03-06" @default.
• W3010071578 modified "2023-09-23" @default.
• W3010071578 title "miEAA 2.0: Integrating multi-species microRNA enrichment analysis and workflow management systems" @default.
• W3010071578 cites W2110417468 @default.
• W3010071578 cites W2130410032 @default.
• W3010071578 cites W2137734450 @default.
• W3010071578 cites W2242206668 @default.
• W3010071578 cites W2288482887 @default.
• W3010071578 cites W2339466004 @default.
• W3010071578 cites W2341117915 @default.
• W3010071578 cites W2343700030 @default.
• W3010071578 cites W2470277042 @default.
• W3010071578 cites W2508362099 @default.
• W3010071578 cites W2524586970 @default.
• W3010071578 cites W2588757737 @default.
• W3010071578 cites W2605897695 @default.
• W3010071578 cites W2757262038 @default.
• W3010071578 cites W2758610627 @default.
• W3010071578 cites W2765372324 @default.
• W3010071578 cites W2778968255 @default.
• W3010071578 cites W2805684402 @default.
• W3010071578 cites W2897805491 @default.
• W3010071578 cites W2898440040 @default.
• W3010071578 cites W2899510892 @default.
• W3010071578 cites W2899798803 @default.
• W3010071578 cites W2919470997 @default.
• W3010071578 cites W2950595506 @default.
• W3010071578 cites W2951144892 @default.
• W3010071578 cites W2952528394 @default.
• W3010071578 cites W2963020007 @default.
• W3010071578 cites W2971928433 @default.
• W3010071578 cites W2980748692 @default.
• W3010071578 cites W2984302209 @default.
• W3010071578 cites W2987567173 @default.
• W3010071578 cites W2990433057 @default.
• W3010071578 cites W2993148047 @default.
• W3010071578 cites W2993221490 @default.
• W3010071578 cites W2993429139 @default.
• W3010071578 cites W3103145119 @default.
• W3010071578 cites W4211064852 @default.
• W3010071578 cites W4246271082 @default.
• W3010071578 cites W4255156463 @default.
• W3010071578 doi "https://doi.org/10.1101/2020.03.05.978890" @default.
• W3010071578 hasPublicationYear "2020" @default.
• W3010071578 type Work @default.
• W3010071578 sameAs 3010071578 @default.
• W3010071578 citedByCount "1" @default.
• W3010071578 countsByYear W30100715782020 @default.
• W3010071578 crossrefType "posted-content" @default.
• W3010071578 hasAuthorship W3010071578A5015677497 @default.
• W3010071578 hasAuthorship W3010071578A5020280119 @default.
• W3010071578 hasAuthorship W3010071578A5054514348 @default.
• W3010071578 hasAuthorship W3010071578A5058152494 @default.
• W3010071578 hasAuthorship W3010071578A5066723446 @default.
• W3010071578 hasAuthorship W3010071578A5075631508 @default.
• W3010071578 hasAuthorship W3010071578A5084504324 @default.
• W3010071578 hasBestOaLocation W30100715781 @default.
• W3010071578 hasConcept C104317684 @default.
• W3010071578 hasConcept C111919701 @default.
• W3010071578 hasConcept C113843644 @default.
• W3010071578 hasConcept C129307140 @default.
• W3010071578 hasConcept C145059251 @default.
• W3010071578 hasConcept C154945302 @default.
• W3010071578 hasConcept C157915830 @default.
• W3010071578 hasConcept C177212765 @default.
• W3010071578 hasConcept C2776321320 @default.
• W3010071578 hasConcept C41008148 @default.
• W3010071578 hasConcept C49305753 @default.
• W3010071578 hasConcept C519991488 @default.
• W3010071578 hasConcept C54355233 @default.
• W3010071578 hasConcept C70721500 @default.
• W3010071578 hasConcept C77088390 @default.
• W3010071578 hasConcept C86803240 @default.
• W3010071578 hasConcept C99613125 @default.
• W3010071578 hasConceptScore W3010071578C104317684 @default.
• W3010071578 hasConceptScore W3010071578C111919701 @default.
• W3010071578 hasConceptScore W3010071578C113843644 @default.
• W3010071578 hasConceptScore W3010071578C129307140 @default.
• W3010071578 hasConceptScore W3010071578C145059251 @default.
• W3010071578 hasConceptScore W3010071578C154945302 @default.
• W3010071578 hasConceptScore W3010071578C157915830 @default.
• W3010071578 hasConceptScore W3010071578C177212765 @default.
• W3010071578 hasConceptScore W3010071578C2776321320 @default.
• W3010071578 hasConceptScore W3010071578C41008148 @default.
• W3010071578 hasConceptScore W3010071578C49305753 @default.
• W3010071578 hasConceptScore W3010071578C519991488 @default.
• W3010071578 hasConceptScore W3010071578C54355233 @default.
• W3010071578 hasConceptScore W3010071578C70721500 @default.
• W3010071578 hasConceptScore W3010071578C77088390 @default.
• W3010071578 hasConceptScore W3010071578C86803240 @default.
• W3010071578 hasConceptScore W3010071578C99613125 @default.

• next