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- W3023641210 abstract "Publisher SummaryThis chapter introduces the important facets of the topic of producing phylogenetic trees, and the direct relevance to the study of infectious organisms' transmission. It is clearly important to be able to reconstruct the phylogeny, both for a group of species and also for the individuals within those species. Phylogenetics is based on the use of observable characteristics of contemporary organisms to try to deduce the sequence of events that occurred during the descent of those organisms. According to Charles Darwin, there are two distinct types of biological evolution—transformational evolution and variational evolution. Phylogenetic tree organizes our knowledge of biodiversity. It explains how closely organisms are related to each other. There are many other important uses of phylogenies including the study of co-phylogeny of hosts and pathogens. The term “pathogen” was coined around 1880, which was a time of great activity in the attempt to depict organismal relationships as trees. Reconstructing a phylogenetic history is conceptually straightforward. Phylogeneticists therefore feel confident that these phylogenetic methods also apply to situations where direct knowledge of the past is absent. Phylogenetic analysis of molecular sequences usually consists of three distinct procedures: sequence alignment, character coding, and tree building, which can be performed easily by choosing some popular computer programs and then using the default parameter values of those programs. There has been interest in the use of networks rather than trees as the basis for phylogenetic analysis." @default.
- W3023641210 created "2020-05-13" @default.
- W3023641210 creator A5077093601 @default.
- W3023641210 date "2011-01-01" @default.
- W3023641210 modified "2023-09-26" @default.
- W3023641210 title "Phylogenetic Analysis of Pathogens" @default.
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- W3023641210 doi "https://doi.org/10.1016/b978-0-12-384890-1.00008-x" @default.
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