Matches in SemOpenAlex for { <https://semopenalex.org/work/W3034618023> ?p ?o ?g. }
Showing items 1 to 99 of
99
with 100 items per page.
- W3034618023 abstract "Abstract Recent advances in experimental techniques have led to a rapid growth in complexity, size, and number of macromolecular structures that are made available through the Protein Data Bank. This creates a challenge for macromolecular visualization and analysis. Macromolecular structure files, such as PDB or PDBx/mmCIF files can be slow to transfer, parse, and hard to incorporate into third-party software tools. Here, we present a new binary and compressed data representation, the MacroMolecular Transmission Format, MMTF, as well as software implementations in several languages that have been developed around it, which address these issues. We describe the new format and its APIs and demonstrate that it is several times faster to parse, and about a quarter of the file size of the current standard format, PDBx/mmCIF. As a consequence of the new data representation, it is now possible to visualize structures with millions of atoms in a web browser, keep the whole PDB archive in memory or parse it within few minutes on average computers, which opens up a new way of thinking how to implement efficient algorithms in structural bioinformatics. The PDB archive is available in MMTF file format through web services and data are updated on a weekly basis." @default.
- W3034618023 created "2020-06-19" @default.
- W3034618023 creator A5003460293 @default.
- W3034618023 creator A5031260889 @default.
- W3034618023 creator A5033139813 @default.
- W3034618023 creator A5037343661 @default.
- W3034618023 creator A5061045572 @default.
- W3034618023 creator A5070583038 @default.
- W3034618023 creator A5077634829 @default.
- W3034618023 date "2017-04-05" @default.
- W3034618023 modified "2023-10-14" @default.
- W3034618023 title "MMTF - an efficient file format for the transmission, visualization, and analysis of macromolecular structures" @default.
- W3034618023 cites W2005112390 @default.
- W3034618023 cites W2008708467 @default.
- W3034618023 cites W2015616539 @default.
- W3034618023 cites W2021064626 @default.
- W3034618023 cites W2086695327 @default.
- W3034618023 cites W2105803236 @default.
- W3034618023 cites W2109476464 @default.
- W3034618023 cites W2114363966 @default.
- W3034618023 cites W2114850508 @default.
- W3034618023 cites W2130479394 @default.
- W3034618023 cites W2140047797 @default.
- W3034618023 cites W2156933902 @default.
- W3034618023 cites W2488156821 @default.
- W3034618023 cites W2517814100 @default.
- W3034618023 cites W2544136853 @default.
- W3034618023 cites W2604075160 @default.
- W3034618023 cites W4234797890 @default.
- W3034618023 doi "https://doi.org/10.1101/122689" @default.
- W3034618023 hasPublicationYear "2017" @default.
- W3034618023 type Work @default.
- W3034618023 sameAs 3034618023 @default.
- W3034618023 citedByCount "0" @default.
- W3034618023 crossrefType "posted-content" @default.
- W3034618023 hasAuthorship W3034618023A5003460293 @default.
- W3034618023 hasAuthorship W3034618023A5031260889 @default.
- W3034618023 hasAuthorship W3034618023A5033139813 @default.
- W3034618023 hasAuthorship W3034618023A5037343661 @default.
- W3034618023 hasAuthorship W3034618023A5061045572 @default.
- W3034618023 hasAuthorship W3034618023A5070583038 @default.
- W3034618023 hasAuthorship W3034618023A5077634829 @default.
- W3034618023 hasBestOaLocation W30346180231 @default.
- W3034618023 hasConcept C119145174 @default.
- W3034618023 hasConcept C121332964 @default.
- W3034618023 hasConcept C124101348 @default.
- W3034618023 hasConcept C136764020 @default.
- W3034618023 hasConcept C17744445 @default.
- W3034618023 hasConcept C186644900 @default.
- W3034618023 hasConcept C199360897 @default.
- W3034618023 hasConcept C199539241 @default.
- W3034618023 hasConcept C2776359362 @default.
- W3034618023 hasConcept C2777904410 @default.
- W3034618023 hasConcept C36464697 @default.
- W3034618023 hasConcept C41008148 @default.
- W3034618023 hasConcept C46141821 @default.
- W3034618023 hasConcept C47701112 @default.
- W3034618023 hasConcept C65556437 @default.
- W3034618023 hasConcept C69131567 @default.
- W3034618023 hasConcept C77088390 @default.
- W3034618023 hasConcept C94625758 @default.
- W3034618023 hasConcept C97250363 @default.
- W3034618023 hasConceptScore W3034618023C119145174 @default.
- W3034618023 hasConceptScore W3034618023C121332964 @default.
- W3034618023 hasConceptScore W3034618023C124101348 @default.
- W3034618023 hasConceptScore W3034618023C136764020 @default.
- W3034618023 hasConceptScore W3034618023C17744445 @default.
- W3034618023 hasConceptScore W3034618023C186644900 @default.
- W3034618023 hasConceptScore W3034618023C199360897 @default.
- W3034618023 hasConceptScore W3034618023C199539241 @default.
- W3034618023 hasConceptScore W3034618023C2776359362 @default.
- W3034618023 hasConceptScore W3034618023C2777904410 @default.
- W3034618023 hasConceptScore W3034618023C36464697 @default.
- W3034618023 hasConceptScore W3034618023C41008148 @default.
- W3034618023 hasConceptScore W3034618023C46141821 @default.
- W3034618023 hasConceptScore W3034618023C47701112 @default.
- W3034618023 hasConceptScore W3034618023C65556437 @default.
- W3034618023 hasConceptScore W3034618023C69131567 @default.
- W3034618023 hasConceptScore W3034618023C77088390 @default.
- W3034618023 hasConceptScore W3034618023C94625758 @default.
- W3034618023 hasConceptScore W3034618023C97250363 @default.
- W3034618023 hasLocation W30346180231 @default.
- W3034618023 hasLocation W30346180232 @default.
- W3034618023 hasOpenAccess W3034618023 @default.
- W3034618023 hasPrimaryLocation W30346180231 @default.
- W3034618023 hasRelatedWork W1998679864 @default.
- W3034618023 hasRelatedWork W2092612882 @default.
- W3034618023 hasRelatedWork W2343540465 @default.
- W3034618023 hasRelatedWork W2884296041 @default.
- W3034618023 hasRelatedWork W2922251278 @default.
- W3034618023 hasRelatedWork W2950192635 @default.
- W3034618023 hasRelatedWork W3034618023 @default.
- W3034618023 hasRelatedWork W3105334093 @default.
- W3034618023 hasRelatedWork W3159719254 @default.
- W3034618023 hasRelatedWork W4298128332 @default.
- W3034618023 isParatext "false" @default.
- W3034618023 isRetracted "false" @default.
- W3034618023 magId "3034618023" @default.
- W3034618023 workType "article" @default.