SemOpenAlex |

SemOpenAlex

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3037604406> ?p ?o ?g. }

Showing items 1 to 86 of 86 with 100 items per page.

W3037604406 endingPage "4534" @default.
W3037604406 startingPage "4532" @default.
W3037604406 abstract "Abstract Summary RegulonDB has collected, harmonized and centralized data from hundreds of experiments for nearly two decades and is considered a point of reference for transcriptional regulation in Escherichia coli K12. Here, we present the regutools R package to facilitate programmatic access to RegulonDB data in computational biology. regutools gives researchers the possibility of writing reproducible workflows with automated queries to RegulonDB. The regutools package serves as a bridge between RegulonDB data and the Bioconductor ecosystem by reusing the data structures and statistical methods powered by other Bioconductor packages. We demonstrate the integration of regutools with Bioconductor by analyzing transcription factor DNA binding sites and transcriptional regulatory networks from RegulonDB. We anticipate that regutools will serve as a useful building block in our progress to further our understanding of gene regulatory networks. Availability and implementation regutools is an R package available through Bioconductor at bioconductor.org/packages/regutools." @default.
W3037604406 created "2020-07-02" @default.
W3037604406 creator A5007971858 @default.
W3037604406 creator A5025595162 @default.
W3037604406 creator A5036343557 @default.
W3037604406 creator A5060505830 @default.
W3037604406 creator A5075275334 @default.
W3037604406 creator A5075979341 @default.
W3037604406 creator A5091338305 @default.
W3037604406 date "2020-06-23" @default.
W3037604406 modified "2023-10-03" @default.
W3037604406 title "Programmatic access to bacterial regulatory networks with regutools" @default.
W3037604406 cites W1973094248 @default.
W3037604406 cites W2056218698 @default.
W3037604406 cites W2131478115 @default.
W3037604406 cites W2145825942 @default.
W3037604406 cites W2232370058 @default.
W3037604406 cites W2411397641 @default.
W3037604406 cites W2740924955 @default.
W3037604406 cites W2900007277 @default.
W3037604406 cites W2951718885 @default.
W3037604406 cites W4238928355 @default.
W3037604406 doi "https://doi.org/10.1093/bioinformatics/btaa575" @default.
W3037604406 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7575047" @default.
W3037604406 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/32573705" @default.
W3037604406 hasPublicationYear "2020" @default.
W3037604406 type Work @default.
W3037604406 sameAs 3037604406 @default.
W3037604406 citedByCount "2" @default.
W3037604406 countsByYear W30376044062022 @default.
W3037604406 crossrefType "journal-article" @default.
W3037604406 hasAuthorship W3037604406A5007971858 @default.
W3037604406 hasAuthorship W3037604406A5025595162 @default.
W3037604406 hasAuthorship W3037604406A5036343557 @default.
W3037604406 hasAuthorship W3037604406A5060505830 @default.
W3037604406 hasAuthorship W3037604406A5075275334 @default.
W3037604406 hasAuthorship W3037604406A5075979341 @default.
W3037604406 hasAuthorship W3037604406A5091338305 @default.
W3037604406 hasBestOaLocation W30376044061 @default.
W3037604406 hasConcept C104317684 @default.
W3037604406 hasConcept C124101348 @default.
W3037604406 hasConcept C177212765 @default.
W3037604406 hasConcept C199360897 @default.
W3037604406 hasConcept C2779694297 @default.
W3037604406 hasConcept C2984074130 @default.
W3037604406 hasConcept C41008148 @default.
W3037604406 hasConcept C54355233 @default.
W3037604406 hasConcept C70721500 @default.
W3037604406 hasConcept C77088390 @default.
W3037604406 hasConcept C86803240 @default.
W3037604406 hasConceptScore W3037604406C104317684 @default.
W3037604406 hasConceptScore W3037604406C124101348 @default.
W3037604406 hasConceptScore W3037604406C177212765 @default.
W3037604406 hasConceptScore W3037604406C199360897 @default.
W3037604406 hasConceptScore W3037604406C2779694297 @default.
W3037604406 hasConceptScore W3037604406C2984074130 @default.
W3037604406 hasConceptScore W3037604406C41008148 @default.
W3037604406 hasConceptScore W3037604406C54355233 @default.
W3037604406 hasConceptScore W3037604406C70721500 @default.
W3037604406 hasConceptScore W3037604406C77088390 @default.
W3037604406 hasConceptScore W3037604406C86803240 @default.
W3037604406 hasFunder F4320323401 @default.
W3037604406 hasFunder F4320332161 @default.
W3037604406 hasIssue "16" @default.
W3037604406 hasLocation W30376044061 @default.
W3037604406 hasLocation W30376044062 @default.
W3037604406 hasLocation W30376044063 @default.
W3037604406 hasOpenAccess W3037604406 @default.
W3037604406 hasPrimaryLocation W30376044061 @default.
W3037604406 hasRelatedWork W2114973294 @default.
W3037604406 hasRelatedWork W2767491792 @default.
W3037604406 hasRelatedWork W2892218945 @default.
W3037604406 hasRelatedWork W2949507023 @default.
W3037604406 hasRelatedWork W2970583336 @default.
W3037604406 hasRelatedWork W3211461584 @default.
W3037604406 hasRelatedWork W3216981213 @default.
W3037604406 hasRelatedWork W4240520821 @default.
W3037604406 hasRelatedWork W4256618498 @default.
W3037604406 hasRelatedWork W4283797545 @default.
W3037604406 hasVolume "36" @default.
W3037604406 isParatext "false" @default.
W3037604406 isRetracted "false" @default.
W3037604406 magId "3037604406" @default.
W3037604406 workType "article" @default.