Matches in SemOpenAlex for { <https://semopenalex.org/work/W3038638933> ?p ?o ?g. }
Showing items 1 to 91 of
91
with 100 items per page.
- W3038638933 endingPage "1736" @default.
- W3038638933 startingPage "1711" @default.
- W3038638933 abstract "Abstract Proteins are linear molecular chains that often fold to function. The topology of folding is widely believed to define its properties and function, and knot theory has been applied to study protein structure and its implications. More that 97% of proteins are, however, classified as unknots when intra-chain interactions are ignored. This raises the question as to whether knot theory can be extended to include intra-chain interactions and thus be able to categorize topology of the proteins that are otherwise classified as unknotted. Here, we develop knot theory for folded linear molecular chains and apply it to proteins. For this purpose, proteins will be thought of as an embedding of a linear segment into three dimensions, with additional structure coming from self-bonding. We then project to a two-dimensional diagram and consider the basic rules of equivalence between two diagrams. We further consider the representation of projections of proteins using Gauss codes, or strings of numbers and letters, and how we can equate these codes with changes allowed in the diagrams. Finally, we explore the possibility of applying the algebraic structure of quandles to distinguish the topologies of proteins. Because of the presence of bonds, we extend the theory to define bondles, a type of quandle particularly adapted to distinguishing the topological types of proteins." @default.
- W3038638933 created "2020-07-10" @default.
- W3038638933 creator A5029816593 @default.
- W3038638933 creator A5041547280 @default.
- W3038638933 creator A5055667213 @default.
- W3038638933 creator A5064978014 @default.
- W3038638933 date "2020-07-01" @default.
- W3038638933 modified "2023-10-13" @default.
- W3038638933 title "Knot theory for proteins: Gauss codes, quandles and bondles" @default.
- W3038638933 cites W1965057964 @default.
- W3038638933 cites W1967586541 @default.
- W3038638933 cites W1967865324 @default.
- W3038638933 cites W1970327764 @default.
- W3038638933 cites W1972757326 @default.
- W3038638933 cites W1981409634 @default.
- W3038638933 cites W20120559 @default.
- W3038638933 cites W2018340497 @default.
- W3038638933 cites W2019218232 @default.
- W3038638933 cites W2063452657 @default.
- W3038638933 cites W2068160157 @default.
- W3038638933 cites W2146767526 @default.
- W3038638933 cites W2316343226 @default.
- W3038638933 cites W2594458869 @default.
- W3038638933 cites W2726187683 @default.
- W3038638933 cites W2748124641 @default.
- W3038638933 cites W2754103563 @default.
- W3038638933 cites W2898577086 @default.
- W3038638933 cites W2901992705 @default.
- W3038638933 cites W2963009389 @default.
- W3038638933 cites W2963612552 @default.
- W3038638933 cites W2963685748 @default.
- W3038638933 cites W2964192687 @default.
- W3038638933 cites W2969429678 @default.
- W3038638933 doi "https://doi.org/10.1007/s10910-020-01151-0" @default.
- W3038638933 hasPublicationYear "2020" @default.
- W3038638933 type Work @default.
- W3038638933 sameAs 3038638933 @default.
- W3038638933 citedByCount "8" @default.
- W3038638933 countsByYear W30386389332020 @default.
- W3038638933 countsByYear W30386389332021 @default.
- W3038638933 countsByYear W30386389332022 @default.
- W3038638933 countsByYear W30386389332023 @default.
- W3038638933 crossrefType "journal-article" @default.
- W3038638933 hasAuthorship W3038638933A5029816593 @default.
- W3038638933 hasAuthorship W3038638933A5041547280 @default.
- W3038638933 hasAuthorship W3038638933A5055667213 @default.
- W3038638933 hasAuthorship W3038638933A5064978014 @default.
- W3038638933 hasBestOaLocation W30386389331 @default.
- W3038638933 hasConcept C114614502 @default.
- W3038638933 hasConcept C127413603 @default.
- W3038638933 hasConcept C143330242 @default.
- W3038638933 hasConcept C154945302 @default.
- W3038638933 hasConcept C184720557 @default.
- W3038638933 hasConcept C2779863119 @default.
- W3038638933 hasConcept C33923547 @default.
- W3038638933 hasConcept C41008148 @default.
- W3038638933 hasConcept C41608201 @default.
- W3038638933 hasConcept C42360764 @default.
- W3038638933 hasConceptScore W3038638933C114614502 @default.
- W3038638933 hasConceptScore W3038638933C127413603 @default.
- W3038638933 hasConceptScore W3038638933C143330242 @default.
- W3038638933 hasConceptScore W3038638933C154945302 @default.
- W3038638933 hasConceptScore W3038638933C184720557 @default.
- W3038638933 hasConceptScore W3038638933C2779863119 @default.
- W3038638933 hasConceptScore W3038638933C33923547 @default.
- W3038638933 hasConceptScore W3038638933C41008148 @default.
- W3038638933 hasConceptScore W3038638933C41608201 @default.
- W3038638933 hasConceptScore W3038638933C42360764 @default.
- W3038638933 hasFunder F4320308306 @default.
- W3038638933 hasIssue "8" @default.
- W3038638933 hasLocation W30386389331 @default.
- W3038638933 hasLocation W30386389332 @default.
- W3038638933 hasOpenAccess W3038638933 @default.
- W3038638933 hasPrimaryLocation W30386389331 @default.
- W3038638933 hasRelatedWork W2032825982 @default.
- W3038638933 hasRelatedWork W2101575898 @default.
- W3038638933 hasRelatedWork W2311482425 @default.
- W3038638933 hasRelatedWork W2793606861 @default.
- W3038638933 hasRelatedWork W2884269424 @default.
- W3038638933 hasRelatedWork W2950745323 @default.
- W3038638933 hasRelatedWork W2951467187 @default.
- W3038638933 hasRelatedWork W2954666679 @default.
- W3038638933 hasRelatedWork W2964242695 @default.
- W3038638933 hasRelatedWork W3207350140 @default.
- W3038638933 hasVolume "58" @default.
- W3038638933 isParatext "false" @default.
- W3038638933 isRetracted "false" @default.
- W3038638933 magId "3038638933" @default.
- W3038638933 workType "article" @default.