FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3039234910> ?p ?o ?g. }

• W3039234910 endingPage "3379" @default.
• W3039234910 startingPage "3363" @default.
• W3039234910 abstract "Abstract Phylogenetic methods can use the sampling times of molecular sequence data to calibrate the molecular clock, enabling the estimation of evolutionary rates and timescales for rapidly evolving pathogens and data sets containing ancient DNA samples. A key aspect of such calibrations is whether a sufficient amount of molecular evolution has occurred over the sampling time window, that is, whether the data can be treated as having come from a measurably evolving population. Here, we investigate the performance of a fully Bayesian evaluation of temporal signal (BETS) in sequence data. The method involves comparing the fit to the data of two models: a model in which the data are accompanied by the actual (heterochronous) sampling times, and a model in which the samples are constrained to be contemporaneous (isochronous). We conducted simulations under a wide range of conditions to demonstrate that BETS accurately classifies data sets according to whether they contain temporal signal or not, even when there is substantial among-lineage rate variation. We explore the behavior of this classification in analyses of five empirical data sets: modern samples of A/H1N1 influenza virus, the bacterium Bordetella pertussis, coronaviruses from mammalian hosts, ancient DNA from Hepatitis B virus, and mitochondrial genomes of dog species. Our results indicate that BETS is an effective alternative to other tests of temporal signal. In particular, this method has the key advantage of allowing a coherent assessment of the entire model, including the molecular clock and tree prior which are essential aspects of Bayesian phylodynamic analyses." @default.
• W3039234910 created "2020-07-10" @default.
• W3039234910 creator A5008635861 @default.
• W3039234910 creator A5022291539 @default.
• W3039234910 creator A5039280845 @default.
• W3039234910 creator A5051736895 @default.
• W3039234910 creator A5055449742 @default.
• W3039234910 creator A5056792309 @default.
• W3039234910 creator A5090497511 @default.
• W3039234910 date "2020-07-06" @default.
• W3039234910 modified "2023-10-15" @default.
• W3039234910 title "Bayesian Evaluation of Temporal Signal in Measurably Evolving Populations" @default.
• W3039234910 cites W1534406401 @default.
• W3039234910 cites W1903589011 @default.
• W3039234910 cites W1983368215 @default.
• W3039234910 cites W1987423081 @default.
• W3039234910 cites W1990119892 @default.
• W3039234910 cites W2000870362 @default.
• W3039234910 cites W2001750285 @default.
• W3039234910 cites W2002858652 @default.
• W3039234910 cites W2009596137 @default.
• W3039234910 cites W2026551295 @default.
• W3039234910 cites W2028707635 @default.
• W3039234910 cites W2029353650 @default.
• W3039234910 cites W2032638170 @default.
• W3039234910 cites W2076365819 @default.
• W3039234910 cites W2088829070 @default.
• W3039234910 cites W2093323099 @default.
• W3039234910 cites W2094939159 @default.
• W3039234910 cites W2098538101 @default.
• W3039234910 cites W2098998255 @default.
• W3039234910 cites W2110480399 @default.
• W3039234910 cites W2111211467 @default.
• W3039234910 cites W2112114816 @default.
• W3039234910 cites W2116433762 @default.
• W3039234910 cites W2117801354 @default.
• W3039234910 cites W2118048521 @default.
• W3039234910 cites W2137553994 @default.
• W3039234910 cites W2139871526 @default.
• W3039234910 cites W2141913814 @default.
• W3039234910 cites W2145126338 @default.
• W3039234910 cites W2146602601 @default.
• W3039234910 cites W2147660889 @default.
• W3039234910 cites W2160502554 @default.
• W3039234910 cites W2167740275 @default.
• W3039234910 cites W2171142493 @default.
• W3039234910 cites W2171571703 @default.
• W3039234910 cites W2178225823 @default.
• W3039234910 cites W2274601509 @default.
• W3039234910 cites W2322358787 @default.
• W3039234910 cites W2467500135 @default.
• W3039234910 cites W2735973935 @default.
• W3039234910 cites W2746487413 @default.
• W3039234910 cites W2794397711 @default.
• W3039234910 cites W2795440218 @default.
• W3039234910 cites W2807308836 @default.
• W3039234910 cites W2901927999 @default.
• W3039234910 cites W2901954177 @default.
• W3039234910 cites W2950066218 @default.
• W3039234910 cites W2951531074 @default.
• W3039234910 cites W2963732842 @default.
• W3039234910 cites W2970477522 @default.
• W3039234910 cites W2971719446 @default.
• W3039234910 cites W4211177544 @default.
• W3039234910 doi "https://doi.org/10.1093/molbev/msaa163" @default.
• W3039234910 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7454806" @default.
• W3039234910 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/32895707" @default.
• W3039234910 hasPublicationYear "2020" @default.
• W3039234910 type Work @default.
• W3039234910 sameAs 3039234910 @default.
• W3039234910 citedByCount "63" @default.
• W3039234910 countsByYear W30392349102020 @default.
• W3039234910 countsByYear W30392349102021 @default.
• W3039234910 countsByYear W30392349102022 @default.
• W3039234910 countsByYear W30392349102023 @default.
• W3039234910 crossrefType "journal-article" @default.
• W3039234910 hasAuthorship W3039234910A5008635861 @default.
• W3039234910 hasAuthorship W3039234910A5022291539 @default.
• W3039234910 hasAuthorship W3039234910A5039280845 @default.
• W3039234910 hasAuthorship W3039234910A5051736895 @default.
• W3039234910 hasAuthorship W3039234910A5055449742 @default.
• W3039234910 hasAuthorship W3039234910A5056792309 @default.
• W3039234910 hasAuthorship W3039234910A5090497511 @default.
• W3039234910 hasBestOaLocation W30392349101 @default.
• W3039234910 hasConcept C104317684 @default.
• W3039234910 hasConcept C106131492 @default.
• W3039234910 hasConcept C107673813 @default.
• W3039234910 hasConcept C140779682 @default.
• W3039234910 hasConcept C144024400 @default.
• W3039234910 hasConcept C149923435 @default.
• W3039234910 hasConcept C154945302 @default.
• W3039234910 hasConcept C160234255 @default.
• W3039234910 hasConcept C166393388 @default.
• W3039234910 hasConcept C193252679 @default.
• W3039234910 hasConcept C196662502 @default.
• W3039234910 hasConcept C207201462 @default.
• W3039234910 hasConcept C2908647359 @default.
• W3039234910 hasConcept C31972630 @default.

• next