Matches in SemOpenAlex for { <https://semopenalex.org/work/W3043445763> ?p ?o ?g. }
- W3043445763 abstract "False smut disease of rice caused by Ustilaginoidea virens, is an emerging threat to rice cultivation worldwide due to its detrimental effects on grain yield and quality. False smut disease severity was 4.44‒17.22% during a roving survey in Kharif 2016 in the four different rice ecosystems of Karnataka, India. Further, 15 pathogen isolates representing four different ecosystems were studied for their virulence and morphometric diversity. Among the 15 strains studied, most virulent strains Uv-Gvt was selected for whole genome sequencing in Illumina NextSeq 500 platform using 2 × 150 bp sequencing chemistry. The total assembled genome of Uv-Gvt was 26.96 Mb, which comprised of 9157 scaffolds with an N50 value of 15,934 bp and 6628 protein-coding genes. Next, the comparative genomic study revealed a similar gene inventory as UV-8b and MAFF 236576 strains reported from China and Japan, respectively. But, 1756 genes were unique to Uv-Gvt strain. The Uv-Gvt genome harbors 422 putative host–pathogen interacting genes compared to 359 and 520 genes in UV-8b and MAFF 236576 strains, respectively. The variant analysis revealed low genetic diversity (0.073‒0.088%) among U. virens strains. Further, phylogenetic analysis using 250 single copy orthologs genes of U. virens revealed a distinct phylogeny and an approximate divergence time. Our study, report the genomic resource of rice false smut pathogen from India, where the disease originated, and this information will have broader applicability in understanding the pathogen population diversity." @default.
- W3043445763 created "2020-07-23" @default.
- W3043445763 creator A5006955849 @default.
- W3043445763 creator A5012146357 @default.
- W3043445763 creator A5014822134 @default.
- W3043445763 creator A5022749110 @default.
- W3043445763 creator A5026389559 @default.
- W3043445763 creator A5032399617 @default.
- W3043445763 creator A5037704304 @default.
- W3043445763 creator A5048348304 @default.
- W3043445763 creator A5048764183 @default.
- W3043445763 creator A5052827122 @default.
- W3043445763 creator A5061151133 @default.
- W3043445763 creator A5085895369 @default.
- W3043445763 creator A5089439082 @default.
- W3043445763 creator A5090250498 @default.
- W3043445763 date "2020-07-19" @default.
- W3043445763 modified "2023-10-17" @default.
- W3043445763 title "Comparative genomics of rice false smut fungi Ustilaginoidea virens Uv-Gvt strain from India reveals genetic diversity and phylogenetic divergence" @default.
- W3043445763 cites W1857076467 @default.
- W3043445763 cites W1984786009 @default.
- W3043445763 cites W1987854582 @default.
- W3043445763 cites W1998671658 @default.
- W3043445763 cites W2005266142 @default.
- W3043445763 cites W2008856488 @default.
- W3043445763 cites W2030966943 @default.
- W3043445763 cites W2041913003 @default.
- W3043445763 cites W2044319399 @default.
- W3043445763 cites W2045204781 @default.
- W3043445763 cites W2046183549 @default.
- W3043445763 cites W2054624670 @default.
- W3043445763 cites W2058630418 @default.
- W3043445763 cites W2062220010 @default.
- W3043445763 cites W2076673025 @default.
- W3043445763 cites W2100661439 @default.
- W3043445763 cites W2106578986 @default.
- W3043445763 cites W2107772251 @default.
- W3043445763 cites W2108234281 @default.
- W3043445763 cites W2108512366 @default.
- W3043445763 cites W2110335151 @default.
- W3043445763 cites W2111756560 @default.
- W3043445763 cites W2115717873 @default.
- W3043445763 cites W2124335694 @default.
- W3043445763 cites W2128242967 @default.
- W3043445763 cites W2130530163 @default.
- W3043445763 cites W2130921685 @default.
- W3043445763 cites W2138369959 @default.
- W3043445763 cites W2141920662 @default.
- W3043445763 cites W2146127418 @default.
- W3043445763 cites W2153452535 @default.
- W3043445763 cites W2155628349 @default.
- W3043445763 cites W2159957100 @default.
- W3043445763 cites W2160718893 @default.
- W3043445763 cites W2160969485 @default.
- W3043445763 cites W2168133698 @default.
- W3043445763 cites W2170551349 @default.
- W3043445763 cites W2178183339 @default.
- W3043445763 cites W2224150270 @default.
- W3043445763 cites W2322699455 @default.
- W3043445763 cites W2345850543 @default.
- W3043445763 cites W2414379662 @default.
- W3043445763 cites W2589379462 @default.
- W3043445763 cites W2765222714 @default.
- W3043445763 cites W2769032008 @default.
- W3043445763 cites W2794032553 @default.
- W3043445763 cites W2799524357 @default.
- W3043445763 cites W915480285 @default.
- W3043445763 doi "https://doi.org/10.1007/s13205-020-02336-9" @default.
- W3043445763 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7370250" @default.
- W3043445763 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/32714737" @default.
- W3043445763 hasPublicationYear "2020" @default.
- W3043445763 type Work @default.
- W3043445763 sameAs 3043445763 @default.
- W3043445763 citedByCount "9" @default.
- W3043445763 countsByYear W30434457632021 @default.
- W3043445763 countsByYear W30434457632022 @default.
- W3043445763 countsByYear W30434457632023 @default.
- W3043445763 crossrefType "journal-article" @default.
- W3043445763 hasAuthorship W3043445763A5006955849 @default.
- W3043445763 hasAuthorship W3043445763A5012146357 @default.
- W3043445763 hasAuthorship W3043445763A5014822134 @default.
- W3043445763 hasAuthorship W3043445763A5022749110 @default.
- W3043445763 hasAuthorship W3043445763A5026389559 @default.
- W3043445763 hasAuthorship W3043445763A5032399617 @default.
- W3043445763 hasAuthorship W3043445763A5037704304 @default.
- W3043445763 hasAuthorship W3043445763A5048348304 @default.
- W3043445763 hasAuthorship W3043445763A5048764183 @default.
- W3043445763 hasAuthorship W3043445763A5052827122 @default.
- W3043445763 hasAuthorship W3043445763A5061151133 @default.
- W3043445763 hasAuthorship W3043445763A5085895369 @default.
- W3043445763 hasAuthorship W3043445763A5089439082 @default.
- W3043445763 hasAuthorship W3043445763A5090250498 @default.
- W3043445763 hasBestOaLocation W30434457632 @default.
- W3043445763 hasConcept C104317684 @default.
- W3043445763 hasConcept C105176652 @default.
- W3043445763 hasConcept C141231307 @default.
- W3043445763 hasConcept C144024400 @default.
- W3043445763 hasConcept C149923435 @default.
- W3043445763 hasConcept C189206191 @default.
- W3043445763 hasConcept C193252679 @default.