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- W3048142151 abstract "SUMMARY The limited number of recombinant events in recombinant inbred lines suggests that for a biparental population with a limited number of recombinant inbred lines, it is unnecessary to genotype the lines with many markers. For genomic prediction and selection, previous studies have demonstrated that only 1000–2000 genome‐wide common markers across all lines/accessions are needed to reach maximum efficiency of genomic prediction in populations. Evaluation of too many markers will not only increase the cost but also generate redundant information. We developed a soybean ( Glycine max ) assay, BARCSoySNP6K, containing 6000 markers, which were carefully chosen from the SoySNP50K assay based on their position in the soybean genome and haplotype block, polymorphism among accessions and genotyping quality. The assay includes 5000 single nucleotide polymorphisms (SNPs) from euchromatic and 1000 from heterochromatic regions. The percentage of SNPs with minor allele frequency >0.10 was 95% and 91% in the euchromatic and heterochromatic regions, respectively. Analysis of progeny from two large families genotyped with SoySNP50K versus BARCSoySNP6K showed that the position of the common markers and number of unique bins along linkage maps were consistent based on the SNPs genotyped with the two assays; however, the rate of redundant markers was dramatically reduced with the BARCSoySNP6K. The BARCSoySNP6K assay is proven as an excellent tool for detecting quantitative trait loci, genomic selection and assessing genetic relationships. The assay is commercialized by Illumina Inc. and being used by soybean breeders and geneticists and the list of SNPs in the assay is an ideal resource for SNP genotyping by targeted amplicon sequencing." @default.
- W3048142151 created "2020-08-13" @default.
- W3048142151 creator A5013972114 @default.
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- W3048142151 date "2020-09-23" @default.
- W3048142151 modified "2023-10-16" @default.
- W3048142151 title "Soybean BARCSoySNP6K: An assay for soybean genetics and breeding research" @default.
- W3048142151 cites W1820802385 @default.
- W3048142151 cites W1909023867 @default.
- W3048142151 cites W1947954067 @default.
- W3048142151 cites W1989785009 @default.
- W3048142151 cites W1996547052 @default.
- W3048142151 cites W2004242066 @default.
- W3048142151 cites W2006991042 @default.
- W3048142151 cites W2011181019 @default.
- W3048142151 cites W2012986985 @default.
- W3048142151 cites W2016901119 @default.
- W3048142151 cites W2025059645 @default.
- W3048142151 cites W2029217472 @default.
- W3048142151 cites W2040989731 @default.
- W3048142151 cites W2044716288 @default.
- W3048142151 cites W2046056761 @default.
- W3048142151 cites W2060705274 @default.
- W3048142151 cites W2064881644 @default.
- W3048142151 cites W2071705564 @default.
- W3048142151 cites W2074042528 @default.
- W3048142151 cites W2078552577 @default.
- W3048142151 cites W2081306085 @default.
- W3048142151 cites W2081818663 @default.
- W3048142151 cites W2089109288 @default.
- W3048142151 cites W2093319611 @default.
- W3048142151 cites W2093409211 @default.
- W3048142151 cites W2097906839 @default.
- W3048142151 cites W2105909203 @default.
- W3048142151 cites W2110899053 @default.
- W3048142151 cites W2112484080 @default.
- W3048142151 cites W2125121305 @default.
- W3048142151 cites W2133400860 @default.
- W3048142151 cites W2133980123 @default.
- W3048142151 cites W2136044834 @default.
- W3048142151 cites W2140247457 @default.
- W3048142151 cites W2141607702 @default.
- W3048142151 cites W2146108696 @default.
- W3048142151 cites W2152664025 @default.
- W3048142151 cites W2153127576 @default.
- W3048142151 cites W2156480474 @default.
- W3048142151 cites W2157023623 @default.
- W3048142151 cites W2159474015 @default.
- W3048142151 cites W2161633633 @default.
- W3048142151 cites W2168002090 @default.
- W3048142151 cites W2169085302 @default.
- W3048142151 cites W2213151699 @default.
- W3048142151 cites W2234549066 @default.
- W3048142151 cites W2286344074 @default.
- W3048142151 cites W2291148541 @default.
- W3048142151 cites W2297710537 @default.
- W3048142151 cites W2314745558 @default.
- W3048142151 cites W2319914235 @default.
- W3048142151 cites W2320668971 @default.
- W3048142151 cites W2341307294 @default.
- W3048142151 cites W2346090657 @default.
- W3048142151 cites W2346533695 @default.
- W3048142151 cites W2398077306 @default.
- W3048142151 cites W2472913907 @default.
- W3048142151 cites W2479490943 @default.
- W3048142151 cites W2494930801 @default.
- W3048142151 cites W2570989112 @default.
- W3048142151 cites W2593487091 @default.
- W3048142151 cites W2607746504 @default.
- W3048142151 cites W2611209364 @default.
- W3048142151 cites W2615507684 @default.
- W3048142151 cites W2665509242 @default.
- W3048142151 cites W2734717763 @default.
- W3048142151 cites W2734954463 @default.
- W3048142151 cites W2770780708 @default.
- W3048142151 cites W2774294814 @default.
- W3048142151 cites W2776177119 @default.
- W3048142151 cites W2789357982 @default.
- W3048142151 cites W2792743466 @default.
- W3048142151 cites W2892244280 @default.
- W3048142151 cites W2900450095 @default.
- W3048142151 cites W2915614615 @default.
- W3048142151 cites W2922406356 @default.
- W3048142151 cites W2928119824 @default.
- W3048142151 cites W2944704619 @default.
- W3048142151 cites W2946371550 @default.
- W3048142151 cites W2969522081 @default.
- W3048142151 cites W2980935430 @default.