FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3085249901> ?p ?o ?g. }

• W3085249901 abstract "Abstract Background Massive forest decline has been observed almost everywhere as a result of negative anthropogenic and climatic effects, which can interact with pests, fungi and other phytopathogens and aggravate their effects. Climatic changes can weaken trees and make fungi, such as Armillaria more destructive. Armillaria borealis (Marxm. & Korhonen) is a fungus from the Physalacriaceae family ( Basidiomycota ) widely distributed in Eurasia, including Siberia and the Far East. Species from this genus cause the root white rot disease that weakens and often kills woody plants. However, little is known about ecological behavior and genetics of A. borealis . According to field research data, A. borealis is less pathogenic than A. ostoyae , and its aggressive behavior is quite rare. Mainly A. borealis behaves as a secondary pathogen killing trees already weakened by other factors. However, changing environment might cause unpredictable effects in fungus behavior. Results The de novo genome assembly and annotation were performed for the A. borealis species for the first time and presented in this study. The A. borealis genome assembly contained ~ 68 Mbp and was comparable with ~ 60 and ~ 79.5 Mbp for the A. ostoyae and A. mellea genomes, respectively. The N50 for contigs equaled 50,544 bp. Functional annotation analysis revealed 21,969 protein coding genes and provided data for further comparative analysis. Repetitive sequences were also identified. The main focus for further study and comparative analysis will be on the enzymes and regulatory factors associated with pathogenicity. Conclusions Pathogenic fungi such as Armillaria are currently one of the main problems in forest conservation. A comprehensive study of these species and their pathogenicity is of great importance and needs good genomic resources. The assembled genome of A. borealis presented in this study is of sufficiently good quality for further detailed comparative study on the composition of enzymes in other Armillaria species. There is also a fundamental problem with the identification and classification of species of the Armillaria genus, where the study of repetitive sequences in the genomes of basidiomycetes and their comparative analysis will help us identify more accurately taxonomy of these species and reveal their evolutionary relationships." @default.
• W3085249901 created "2020-09-21" @default.
• W3085249901 creator A5004276854 @default.
• W3085249901 creator A5014649184 @default.
• W3085249901 creator A5015025671 @default.
• W3085249901 creator A5052739436 @default.
• W3085249901 creator A5068621990 @default.
• W3085249901 creator A5069296964 @default.
• W3085249901 creator A5074346938 @default.
• W3085249901 creator A5079170168 @default.
• W3085249901 creator A5085239561 @default.
• W3085249901 creator A5090218503 @default.
• W3085249901 date "2020-09-01" @default.
• W3085249901 modified "2023-10-15" @default.
• W3085249901 title "De novo sequencing, assembly and functional annotation of Armillaria borealis genome" @default.
• W3085249901 cites W126487408 @default.
• W3085249901 cites W1536652536 @default.
• W3085249901 cites W1984381248 @default.
• W3085249901 cites W1996700726 @default.
• W3085249901 cites W2007239295 @default.
• W3085249901 cites W2032162599 @default.
• W3085249901 cites W2041174584 @default.
• W3085249901 cites W2054562396 @default.
• W3085249901 cites W2058296373 @default.
• W3085249901 cites W2067165676 @default.
• W3085249901 cites W2071395072 @default.
• W3085249901 cites W2074774056 @default.
• W3085249901 cites W2091448229 @default.
• W3085249901 cites W2097065948 @default.
• W3085249901 cites W2105263033 @default.
• W3085249901 cites W2120902911 @default.
• W3085249901 cites W2124799197 @default.
• W3085249901 cites W2129296076 @default.
• W3085249901 cites W2132141594 @default.
• W3085249901 cites W2137037625 @default.
• W3085249901 cites W2138517984 @default.
• W3085249901 cites W2141079757 @default.
• W3085249901 cites W2148239117 @default.
• W3085249901 cites W2155628349 @default.
• W3085249901 cites W2159769472 @default.
• W3085249901 cites W2160315075 @default.
• W3085249901 cites W2161735045 @default.
• W3085249901 cites W2164154943 @default.
• W3085249901 cites W2171468101 @default.
• W3085249901 cites W2171685679 @default.
• W3085249901 cites W2180776788 @default.
• W3085249901 cites W2216234219 @default.
• W3085249901 cites W2273647910 @default.
• W3085249901 cites W2394727514 @default.
• W3085249901 cites W2399841009 @default.
• W3085249901 cites W2468803195 @default.
• W3085249901 cites W2570153243 @default.
• W3085249901 cites W2733856816 @default.
• W3085249901 cites W2742822384 @default.
• W3085249901 cites W2755362350 @default.
• W3085249901 cites W2765219785 @default.
• W3085249901 cites W2898188740 @default.
• W3085249901 cites W2920882904 @default.
• W3085249901 cites W2968159656 @default.
• W3085249901 cites W3022861996 @default.
• W3085249901 doi "https://doi.org/10.1186/s12864-020-06964-6" @default.
• W3085249901 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7487993" @default.
• W3085249901 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/32912216" @default.
• W3085249901 hasPublicationYear "2020" @default.
• W3085249901 type Work @default.
• W3085249901 sameAs 3085249901 @default.
• W3085249901 citedByCount "7" @default.
• W3085249901 countsByYear W30852499012020 @default.
• W3085249901 countsByYear W30852499012021 @default.
• W3085249901 countsByYear W30852499012022 @default.
• W3085249901 countsByYear W30852499012023 @default.
• W3085249901 crossrefType "journal-article" @default.
• W3085249901 hasAuthorship W3085249901A5004276854 @default.
• W3085249901 hasAuthorship W3085249901A5014649184 @default.
• W3085249901 hasAuthorship W3085249901A5015025671 @default.
• W3085249901 hasAuthorship W3085249901A5052739436 @default.
• W3085249901 hasAuthorship W3085249901A5068621990 @default.
• W3085249901 hasAuthorship W3085249901A5069296964 @default.
• W3085249901 hasAuthorship W3085249901A5074346938 @default.
• W3085249901 hasAuthorship W3085249901A5079170168 @default.
• W3085249901 hasAuthorship W3085249901A5085239561 @default.
• W3085249901 hasAuthorship W3085249901A5090218503 @default.
• W3085249901 hasBestOaLocation W30852499011 @default.
• W3085249901 hasConcept C104317684 @default.
• W3085249901 hasConcept C141231307 @default.
• W3085249901 hasConcept C150194340 @default.
• W3085249901 hasConcept C162317418 @default.
• W3085249901 hasConcept C18903297 @default.
• W3085249901 hasConcept C18949551 @default.
• W3085249901 hasConcept C24432333 @default.
• W3085249901 hasConcept C2777245169 @default.
• W3085249901 hasConcept C2779678110 @default.
• W3085249901 hasConcept C2780394861 @default.
• W3085249901 hasConcept C54355233 @default.
• W3085249901 hasConcept C59822182 @default.
• W3085249901 hasConcept C78458016 @default.
• W3085249901 hasConcept C86803240 @default.
• W3085249901 hasConceptScore W3085249901C104317684 @default.
• W3085249901 hasConceptScore W3085249901C141231307 @default.
• W3085249901 hasConceptScore W3085249901C150194340 @default.

• next