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• W3087961332 abstract "Advances in DNA-sequencing technology have far outpaced Moore's law, imposing significant challenges on the computationally intensive secondary analysis in the sequencing pipeline. An accelerator for seed extension, a critical and computationally intensive step in genome sequencing, is proposed. The accelerator, implementing a string-independent automata, consists of a triangular array of $25times 2$ custom-designed processing elements. It performs 2.46 million reads per second (MRPS), achieving a $1581times $ improvement in power efficiency and $165.5times $ smaller silicon footprint compared to a system setting with dual-socket Xeon E5-2697 v3 server processors." @default.
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• W3087961332 date "2021-03-01" @default.
• W3087961332 modified "2023-09-27" @default.
• W3087961332 title "A 2.46M Reads/s Seed-Extension Accelerator for Next-Generation Sequencing Using a String-Independent PE Array" @default.
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• W3087961332 doi "https://doi.org/10.1109/jssc.2020.3023822" @default.
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