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• W3089220187 abstract "Abstract Largemouth bass (LMB; Micropterus salmoides ) has been an economically important fish in North America, Europe, and China. This study obtained a chromosome‐level genome assembly of LMB using PacBio and Hi‐C sequencing. The final assembled genome is 964 Mb, with contig N50 and scaffold N50 values of 1.23 Mb and 36.48 Mb, respectively. Combining with RNA sequencing data, we annotated a total of 23,701 genes. Chromosomal assembly and syntenic analysis proved that, unlike most Perciformes with the popular haploid chromosome number of 24, LMB has only 23 chromosomes (Chr), among which the Chr1 seems to be resulted from a chromosomal fusion event. LMB is phylogenetically closely related to European seabass and spotted seabass, diverging 64.1 million years ago (mya) from the two seabass species. Eight gene families comprising 294 genes associated with ionic regulation were identified through positive selection, transcriptome and genome comparisons. These genes involved in iron facilitated diffusion (such as claudin, aquaporins, sodium channel protein and so on) and others related to ion active transport (such as sodium/potassium‐transporting ATPase and sodium/calcium exchanger). The claudin gene family, which is critical for regulating cell tight junctions and osmotic homeostasis, showed a significant expansion in LMB with 27 family members and 68 copies for salinity adaptation. In summary, we reported the first high‐quality LMB genome, and provided insights into the molecular mechanisms of LMB adaptation to fresh and brackish water. The chromosome‐level LMB genome will also be a valuable genomic resource for in‐depth biological and evolutionary studies, germplasm conservation and genetic breeding of LMB." @default.
• W3089220187 created "2020-10-01" @default.
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• W3089220187 date "2020-10-20" @default.
• W3089220187 modified "2023-10-14" @default.
• W3089220187 title "Chromosome‐level genome assembly for the largemouth bass <i>Micropterus salmoides</i> provides insights into adaptation to fresh and brackish water" @default.
• W3089220187 cites W1913083253 @default.
• W3089220187 cites W1938605405 @default.
• W3089220187 cites W1964872189 @default.
• W3089220187 cites W1967754119 @default.
• W3089220187 cites W1969201065 @default.
• W3089220187 cites W1971572816 @default.
• W3089220187 cites W1982509114 @default.
• W3089220187 cites W1982855075 @default.
• W3089220187 cites W1996700726 @default.
• W3089220187 cites W1997215643 @default.
• W3089220187 cites W2019973654 @default.
• W3089220187 cites W2026940230 @default.
• W3089220187 cites W2027847170 @default.
• W3089220187 cites W2029207549 @default.
• W3089220187 cites W2030204821 @default.
• W3089220187 cites W2036628186 @default.
• W3089220187 cites W2054296412 @default.
• W3089220187 cites W2055561241 @default.
• W3089220187 cites W2056907676 @default.
• W3089220187 cites W2059922835 @default.
• W3089220187 cites W2068641215 @default.
• W3089220187 cites W2071501400 @default.
• W3089220187 cites W2081126375 @default.
• W3089220187 cites W2082330286 @default.
• W3089220187 cites W2096745053 @default.
• W3089220187 cites W2097065948 @default.
• W3089220187 cites W2097172649 @default.
• W3089220187 cites W2101868321 @default.
• W3089220187 cites W2101976554 @default.
• W3089220187 cites W2102163928 @default.
• W3089220187 cites W2102278945 @default.
• W3089220187 cites W2103148772 @default.
• W3089220187 cites W2107060225 @default.
• W3089220187 cites W2108234281 @default.
• W3089220187 cites W2108787198 @default.
• W3089220187 cites W2114126777 @default.
• W3089220187 cites W2116423958 @default.
• W3089220187 cites W2117600016 @default.
• W3089220187 cites W2122821321 @default.
• W3089220187 cites W2134526812 @default.
• W3089220187 cites W2137084536 @default.
• W3089220187 cites W2137791692 @default.
• W3089220187 cites W2138773756 @default.
• W3089220187 cites W2143574014 @default.
• W3089220187 cites W2147810729 @default.
• W3089220187 cites W2148698435 @default.
• W3089220187 cites W2148853951 @default.
• W3089220187 cites W2152605077 @default.
• W3089220187 cites W2152925935 @default.
• W3089220187 cites W2154475381 @default.
• W3089220187 cites W2155628349 @default.
• W3089220187 cites W2159038577 @default.
• W3089220187 cites W2159512882 @default.
• W3089220187 cites W2166187656 @default.
• W3089220187 cites W2172074726 @default.
• W3089220187 cites W2179438025 @default.
• W3089220187 cites W2185693210 @default.
• W3089220187 cites W2341858319 @default.
• W3089220187 cites W2347379373 @default.
• W3089220187 cites W2396077153 @default.
• W3089220187 cites W2399241400 @default.
• W3089220187 cites W2473947236 @default.
• W3089220187 cites W2481029670 @default.
• W3089220187 cites W2559011563 @default.
• W3089220187 cites W2712034706 @default.
• W3089220187 cites W2736340577 @default.
• W3089220187 cites W2768238073 @default.
• W3089220187 cites W2774089051 @default.
• W3089220187 cites W2789807411 @default.
• W3089220187 cites W2803572653 @default.
• W3089220187 cites W2911583913 @default.
• W3089220187 cites W2927847049 @default.
• W3089220187 cites W2937944527 @default.
• W3089220187 cites W2946706395 @default.
• W3089220187 cites W2947952379 @default.
• W3089220187 cites W2949894468 @default.
• W3089220187 cites W2950354111 @default.
• W3089220187 cites W2952395009 @default.
• W3089220187 cites W2953052017 @default.
• W3089220187 cites W2981611080 @default.
• W3089220187 cites W3024264179 @default.
• W3089220187 cites W3080997834 @default.

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