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- W3096906291 abstract "To identify genome-based features characteristic of the avian and human pathogen Chlamydia(C.) psittaci and related chlamydiae, we analyzed whole-genome sequences of 33 strains belonging to 12 species. Using a novel genome analysis tool termed Roary ILP Bacterial Annotation Pipeline (RIBAP), this panel of strains was shown to share a large core genome comprising 784 genes and representing approximately 80% of individual genomes. Analyzing the most variable genomic sites, we identified a set of features of C. psittaci that in its entirety is characteristic of this species: (i) a relatively short plasticity zone of less than 30,000 nt without a tryptophan operon (also in C. abortus, C. avium, C. gallinacea, C. pneumoniae), (ii) a characteristic set of of Inc proteins comprising IncA, B, C, V, X, Y (with homologs in C. abortus, C. caviae and C. felis as closest relatives), (iii) a 502-aa SinC protein, the largest among Chlamydia spp., and (iv) an elevated number of Pmp proteins of subtype G (14 in C. psittaci, 14 in Cand. C. ibidis). In combination with future functional studies, the common and distinctive criteria revealed in this study provide important clues for understanding the complexity of host-specific behavior of individual Chlamydia spp." @default.
- W3096906291 created "2020-11-09" @default.
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- W3096906291 date "2020-10-28" @default.
- W3096906291 modified "2023-10-12" @default.
- W3096906291 title "Comparative Genome Analysis of 33 Chlamydia Strains Reveals Characteristic Features of Chlamydia Psittaci and Closely Related Species" @default.
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- W3096906291 doi "https://doi.org/10.3390/pathogens9110899" @default.
- W3096906291 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7694038" @default.
- W3096906291 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33126635" @default.