FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3096971964> ?p ?o ?g. }

• W3096971964 abstract "The transition network provides a key to reveal the thermodynamic and kinetic properties of biomolecular systems. In this paper, we introduce a new method, named effective energy rescaling space trajectory mapping (EspcTM), to detect metastable states and construct transition networks based on the simulation trajectories of the complex biomolecular system. It mapped simulation trajectories into an orthogonal function space, whose bases were rescaled by effective energy, and clustered the interrelation between these trajectories to locate metastable states. By using the EspcTM method, we identified the metastable states and elucidated interstate transition kinetics of a Brownian particle and a dodecapeptide. It was also found that the scaling parameters of effective energy provided a clue to the dominating factors in dynamics. We believe that the EspcTM method is a useful tool for the studies of dynamics of the complex system, and may provide new insight into the understanding of thermodynamics and kinetics of biomolecular systems." @default.
• W3096971964 created "2020-11-09" @default.
• W3096971964 creator A5000505154 @default.
• W3096971964 creator A5017777141 @default.
• W3096971964 creator A5045074001 @default.
• W3096971964 date "2020-10-27" @default.
• W3096971964 modified "2023-09-26" @default.
• W3096971964 title "EspcTM: Kinetic Transition Network Based on Trajectory Mapping in Effective Energy Rescaling Space" @default.
• W3096971964 cites W1648597485 @default.
• W3096971964 cites W1959245158 @default.
• W3096971964 cites W1966078827 @default.
• W3096971964 cites W1976136643 @default.
• W3096971964 cites W1978159078 @default.
• W3096971964 cites W1978386801 @default.
• W3096971964 cites W1985196112 @default.
• W3096971964 cites W2001753219 @default.
• W3096971964 cites W2005768448 @default.
• W3096971964 cites W2007662810 @default.
• W3096971964 cites W2008708467 @default.
• W3096971964 cites W2012029966 @default.
• W3096971964 cites W2012165941 @default.
• W3096971964 cites W2015656580 @default.
• W3096971964 cites W2025899185 @default.
• W3096971964 cites W2031045201 @default.
• W3096971964 cites W2033738243 @default.
• W3096971964 cites W2034088125 @default.
• W3096971964 cites W2034667953 @default.
• W3096971964 cites W2035266068 @default.
• W3096971964 cites W2044846931 @default.
• W3096971964 cites W2047962024 @default.
• W3096971964 cites W2053348581 @default.
• W3096971964 cites W2053960740 @default.
• W3096971964 cites W2054592353 @default.
• W3096971964 cites W2062421175 @default.
• W3096971964 cites W2063021109 @default.
• W3096971964 cites W2066961392 @default.
• W3096971964 cites W2067174909 @default.
• W3096971964 cites W2072163112 @default.
• W3096971964 cites W2078889580 @default.
• W3096971964 cites W2083144176 @default.
• W3096971964 cites W2085213650 @default.
• W3096971964 cites W2086608546 @default.
• W3096971964 cites W2086621451 @default.
• W3096971964 cites W2088647884 @default.
• W3096971964 cites W2089640245 @default.
• W3096971964 cites W2090398157 @default.
• W3096971964 cites W2091701505 @default.
• W3096971964 cites W2091707670 @default.
• W3096971964 cites W2093221728 @default.
• W3096971964 cites W2113635620 @default.
• W3096971964 cites W2116503672 @default.
• W3096971964 cites W2117100297 @default.
• W3096971964 cites W2120595908 @default.
• W3096971964 cites W2126103104 @default.
• W3096971964 cites W2127919322 @default.
• W3096971964 cites W2130949317 @default.
• W3096971964 cites W2133620840 @default.
• W3096971964 cites W2140918987 @default.
• W3096971964 cites W2154310160 @default.
• W3096971964 cites W2158476854 @default.
• W3096971964 cites W2160341881 @default.
• W3096971964 cites W2165186407 @default.
• W3096971964 cites W2226825552 @default.
• W3096971964 cites W2265800909 @default.
• W3096971964 cites W2315297180 @default.
• W3096971964 cites W2461221920 @default.
• W3096971964 cites W2605609067 @default.
• W3096971964 cites W2609912642 @default.
• W3096971964 cites W2725171488 @default.
• W3096971964 cites W2760982347 @default.
• W3096971964 cites W2764032733 @default.
• W3096971964 cites W2783073729 @default.
• W3096971964 cites W2806176412 @default.
• W3096971964 cites W285889497 @default.
• W3096971964 cites W2906468913 @default.
• W3096971964 cites W2910993633 @default.
• W3096971964 cites W2922133433 @default.
• W3096971964 cites W2952289011 @default.
• W3096971964 cites W2952573657 @default.
• W3096971964 cites W2952711759 @default.
• W3096971964 cites W2965799343 @default.
• W3096971964 cites W2972046608 @default.
• W3096971964 cites W2990098065 @default.
• W3096971964 cites W3011903521 @default.
• W3096971964 cites W3100810942 @default.
• W3096971964 cites W4255594044 @default.
• W3096971964 cites W4290856507 @default.
• W3096971964 doi "https://doi.org/10.3389/fmolb.2020.589718" @default.
• W3096971964 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7653181" @default.
• W3096971964 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33195438" @default.
• W3096971964 hasPublicationYear "2020" @default.
• W3096971964 type Work @default.
• W3096971964 sameAs 3096971964 @default.
• W3096971964 citedByCount "0" @default.
• W3096971964 crossrefType "journal-article" @default.
• W3096971964 hasAuthorship W3096971964A5000505154 @default.
• W3096971964 hasAuthorship W3096971964A5017777141 @default.
• W3096971964 hasAuthorship W3096971964A5045074001 @default.
• W3096971964 hasBestOaLocation W30969719641 @default.
• W3096971964 hasConcept C111919701 @default.

• next