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• W3097783670 abstract "The soil-borne fungus Dactylonectria torresensis is the most common causal agent of black-foot disease in Europe. However, there is a lack of understanding on how this fungus can provoke plant symptoms. In this study, we sequenced, annotated and analyzed the genomes of three isolates of D. torresensis collected from asymptomatic vine, weed and soil. Sequenced genomes were further compared to those of 27 fungal species including root and aerial pathogens, white rot degraders, indoor biodeterioration agents, saprotrophs, dark septate endophytes and mycorrhiza. Strains of D. torresensis present genomes with between 64 and 65 Mbp and with up to 18,548 predicted genes for each strain. Average Nucleotide Identity (ANI) shows that strains are different according to genome contents. Clusters of orthologous groups were compared, and clusters of genes related to necroses were particularly detected in all strains of D. torresensis (necrosis inducing peptides and proteins, and ethylene inducing peptides) as well as several genes involved in resistance against fungicides frequently used in viticulture such as copper. Interestingly, an expanded high number of genes related to carbohydrate-active enzymes were detected in each Dactylonectria strain, especially those related to glycoside hydrolases that could be involved in penetration of plant tissues or pathogenicity. An increased number of candidate genes for CAZyme classes AA9 and AA3-1 supports the ability of strains to efficiently degrade plant material. High numbers of genes of D. torresensis related to secretome and small secreted proteins were further characterized. Moreover, the presence of several gene clusters such as fujikurin-like genes was detected and were normally found in Fusariumfujikuroi, that have been linked to fungal pathogenicity. The phenotypes of the three strains investigated showed further difference in light response. We found that Dactylonectria strains have an increased number of photoreceptor encoding genes and we showed sequence alterations. Altogether, the results highlight several gene clusters present in D. torresensis strains that could be linked to endophytic lifestyle, pathogenicity, plant maceration and degradation of plant tissues as well as adaptation to soil contaminated with metals and metalloids and light response." @default.
• W3097783670 created "2020-11-09" @default.
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• W3097783670 date "2020-10-29" @default.
• W3097783670 modified "2023-10-09" @default.
• W3097783670 title "Comparative Genomic Analysis of Dactylonectria torresensis Strains from Grapevine, Soil and Weed Highlights Potential Mechanisms in Pathogenicity and Endophytic Lifestyle" @default.
• W3097783670 cites W1523902116 @default.
• W3097783670 cites W1642117298 @default.
• W3097783670 cites W1964839440 @default.
• W3097783670 cites W1969042907 @default.
• W3097783670 cites W1969079198 @default.
• W3097783670 cites W1973047225 @default.
• W3097783670 cites W1975078409 @default.
• W3097783670 cites W1976035191 @default.
• W3097783670 cites W1976884477 @default.
• W3097783670 cites W1977413428 @default.
• W3097783670 cites W1989801477 @default.
• W3097783670 cites W1991920443 @default.
• W3097783670 cites W1996700726 @default.
• W3097783670 cites W1996974192 @default.
• W3097783670 cites W1996997059 @default.
• W3097783670 cites W1998671658 @default.
• W3097783670 cites W2003266704 @default.
• W3097783670 cites W2009353605 @default.
• W3097783670 cites W2012694060 @default.
• W3097783670 cites W2044241959 @default.
• W3097783670 cites W2054562396 @default.
• W3097783670 cites W2054768195 @default.
• W3097783670 cites W2056072739 @default.
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• W3097783670 cites W2102835673 @default.
• W3097783670 cites W2103539617 @default.
• W3097783670 cites W2107772251 @default.
• W3097783670 cites W2111281047 @default.
• W3097783670 cites W2118159627 @default.
• W3097783670 cites W2120902911 @default.
• W3097783670 cites W2121517534 @default.
• W3097783670 cites W2125887600 @default.
• W3097783670 cites W2128242967 @default.
• W3097783670 cites W2128606612 @default.
• W3097783670 cites W2131271579 @default.
• W3097783670 cites W2134220168 @default.
• W3097783670 cites W2138880261 @default.
• W3097783670 cites W2140413947 @default.
• W3097783670 cites W2144923485 @default.
• W3097783670 cites W2152207030 @default.
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• W3097783670 cites W2162002946 @default.
• W3097783670 cites W2165016285 @default.
• W3097783670 cites W2170551349 @default.
• W3097783670 cites W2223752691 @default.
• W3097783670 cites W2343759660 @default.
• W3097783670 cites W2465529438 @default.
• W3097783670 cites W2545013084 @default.
• W3097783670 cites W2545252662 @default.
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• W3097783670 cites W2578376593 @default.
• W3097783670 cites W2611292919 @default.
• W3097783670 cites W2613787240 @default.
• W3097783670 cites W2622859730 @default.
• W3097783670 cites W2626158622 @default.
• W3097783670 cites W2650152358 @default.
• W3097783670 cites W2758286886 @default.
• W3097783670 cites W2785833536 @default.
• W3097783670 cites W2801098730 @default.
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• W3097783670 cites W2900030356 @default.
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• W3097783670 doi "https://doi.org/10.3390/jof6040255" @default.
• W3097783670 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7712071" @default.
• W3097783670 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33138048" @default.
• W3097783670 hasPublicationYear "2020" @default.
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