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• W3107002158 abstract "The potassium transporter high-affinity K+ transporter/K+ uptake permease/K+ transporter (HAK/KUP/KT) family plays a vital role in potassium uptake, and potassium ion (K+)-mediated environmental stress. In the present study, we identified 22 IbHAK/KUP/KT (HAK) genes in sweet potato [Ipomoea batata (L.) Lam] and the same number of HAK genes from sweet potato wild relative Ipomoea trifida. Phylogeny analysis indicated that the HAKs can be divided into five clades. Chromosomal distribution and genome synteny analyses revealed two tandem-duplicated gene pairs IbHAK16/17 and IbHAK17/18 on chromosomes 13 and eight segmental-duplicated gene pairs on chromosomes 1, 3, 5, 8, 10, 12, 14 among the IbHAK gene family. Eleven orthologous HAK gene pairs between I. batata and I. trifida were involved in the duplication of genomic blocks based on comparative genomic analysis. The Ka/Ks ratios of these IbHAK genes ranged from 0.02 to 0.55(< 1), further indicated that purifying selection was the primary force driving the evolution of HAKs in Ipomoea. A heat map based on RNA-seq data showed that 13 HAKs in Xushu32 (a K+-tolerant sweet potato genotype) and 10 HAKs in Ningzi1 (a K+-sensitive sweet potato genotype) in response to K+ deficiency stress. Quantitative real-time PCR (qRT-PCR) analysis revealed IbHAK2, -3, -8, -10, -11, -18, -19, and -21 were induced in both Xushu32 and Ningzi1 under low K+ stress. Compared with other IbHAK genes, IbHAK8 showed more strongly upregulation after exposure to drought and salt stress. Furthermore, co-expression analysis showed that only IbHAK8 of 22 IbHAK genes involved in network interactions with 30 genes related to abiotic and biotic stresses. Taken together, these results are helpful for further functional studies on IbHAK and molecular breeding of sweet potato.The online version contains supplementary material available at 10.1007/s13205-020-02552-3." @default.
• W3107002158 created "2020-12-07" @default.
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• W3107002158 date "2020-11-27" @default.
• W3107002158 modified "2023-10-05" @default.
• W3107002158 title "Genome-wide characterization and expression analysis of HAK K+ transport family in Ipomoea" @default.
• W3107002158 cites W1849139039 @default.
• W3107002158 cites W1946573817 @default.
• W3107002158 cites W1978840546 @default.
• W3107002158 cites W1982032033 @default.
• W3107002158 cites W1986378248 @default.
• W3107002158 cites W2000972613 @default.
• W3107002158 cites W2001374342 @default.
• W3107002158 cites W2010784669 @default.
• W3107002158 cites W2023286100 @default.
• W3107002158 cites W2028841756 @default.
• W3107002158 cites W2029196567 @default.
• W3107002158 cites W2029256174 @default.
• W3107002158 cites W2029509192 @default.
• W3107002158 cites W2034547908 @default.
• W3107002158 cites W2045201404 @default.
• W3107002158 cites W2064111523 @default.
• W3107002158 cites W2064482215 @default.
• W3107002158 cites W2068397232 @default.
• W3107002158 cites W2070057666 @default.
• W3107002158 cites W2072681680 @default.
• W3107002158 cites W2075190724 @default.
• W3107002158 cites W2089938995 @default.
• W3107002158 cites W2089971672 @default.
• W3107002158 cites W2096288168 @default.
• W3107002158 cites W2098119559 @default.
• W3107002158 cites W2104076015 @default.
• W3107002158 cites W2107277218 @default.
• W3107002158 cites W2112477926 @default.
• W3107002158 cites W2116749397 @default.
• W3107002158 cites W2120678711 @default.
• W3107002158 cites W2123446746 @default.
• W3107002158 cites W2132581688 @default.
• W3107002158 cites W2132632499 @default.
• W3107002158 cites W2136534900 @default.
• W3107002158 cites W2136675709 @default.
• W3107002158 cites W2137015675 @default.
• W3107002158 cites W2138122982 @default.
• W3107002158 cites W2141885858 @default.
• W3107002158 cites W2146744325 @default.
• W3107002158 cites W2146978320 @default.
• W3107002158 cites W2152339377 @default.
• W3107002158 cites W2155224484 @default.
• W3107002158 cites W2157032799 @default.
• W3107002158 cites W2157659277 @default.
• W3107002158 cites W2161467545 @default.
• W3107002158 cites W2168436245 @default.
• W3107002158 cites W2192080449 @default.
• W3107002158 cites W2271772225 @default.
• W3107002158 cites W2273084189 @default.
• W3107002158 cites W2278652342 @default.
• W3107002158 cites W2321187909 @default.
• W3107002158 cites W2325985707 @default.
• W3107002158 cites W2346941237 @default.
• W3107002158 cites W2731755839 @default.
• W3107002158 cites W2734699300 @default.
• W3107002158 cites W2744997504 @default.
• W3107002158 cites W2746799875 @default.
• W3107002158 cites W2787341651 @default.
• W3107002158 cites W2806480955 @default.
• W3107002158 cites W2809712085 @default.
• W3107002158 cites W2889826024 @default.
• W3107002158 cites W2898413198 @default.
• W3107002158 cites W2898783558 @default.
• W3107002158 cites W2904949942 @default.
• W3107002158 cites W2905542917 @default.
• W3107002158 cites W2921991730 @default.
• W3107002158 cites W2945831789 @default.
• W3107002158 cites W2960370164 @default.
• W3107002158 cites W2982064363 @default.
• W3107002158 cites W2992191743 @default.
• W3107002158 cites W2999998188 @default.
• W3107002158 cites W3005398178 @default.
• W3107002158 cites W3028724819 @default.
• W3107002158 cites W3035217104 @default.
• W3107002158 cites W3036319615 @default.
• W3107002158 cites W3080398397 @default.
• W3107002158 cites W4210400672 @default.
• W3107002158 cites W4243672711 @default.
• W3107002158 cites W4320301318 @default.
• W3107002158 cites W923792657 @default.
• W3107002158 doi "https://doi.org/10.1007/s13205-020-02552-3" @default.
• W3107002158 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7695775" @default.
• W3107002158 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33269187" @default.
• W3107002158 hasPublicationYear "2020" @default.
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