FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3108661946> ?p ?o ?g. }

• W3108661946 abstract "Abstract Dichapetalum cymosum produces the toxic fluorinated metabolite, fluoroacetate, presumably as a defence mechanism. Given the rarity of fluorinated metabolites in nature, the biosynthetic origin and function of fluoroacetate have been of particular interest. However, the mechanism for fluorination in D. cymosum was never elucidated. More importantly, there is a severe lack in knowledge on a genetic level for fluorometabolite-producing plants, impeding research on the subject. Here, we report on the first transcriptome for D. cymosum and investigate the wound response for insights into fluorometabolite production. Mechanical wounding studies were performed and libraries of the unwounded (control) and wounded (30 and 60 min post wounding) plant were sequenced using the Illumina HiSeq platform. A combined reference assembly generated 77,845 transcripts. Using the SwissProt, TrEMBL, GO, eggNOG, KEGG, Pfam, EC and PlantTFDB databases, a 69% annotation rate was achieved. Differential expression analysis revealed the regulation of 364 genes in response to wounding. The wound responses in D. cymosum included key mechanisms relating to signalling cascades, phytohormone regulation, transcription factors and defence-related secondary metabolites. However, the role of fluoroacetate in inducible wound responses remains unclear. Bacterial fluorinases were searched against the D. cymosum transcriptome but transcripts with homology were not detected suggesting the presence of a potentially different fluorinating enzyme in plants. Nevertheless, the transcriptome produced in this study significantly increases genetic resources available for D. cymosum and will assist with future research into fluorometabolite-producing plants." @default.
• W3108661946 created "2020-12-07" @default.
• W3108661946 creator A5005114133 @default.
• W3108661946 creator A5010060892 @default.
• W3108661946 creator A5031391004 @default.
• W3108661946 creator A5062745954 @default.
• W3108661946 creator A5064639220 @default.
• W3108661946 creator A5072837094 @default.
• W3108661946 creator A5079517255 @default.
• W3108661946 date "2020-11-25" @default.
• W3108661946 modified "2023-09-26" @default.
• W3108661946 title "Functional characterisation of the transcriptome from leaf tissue of the fluoroacetate-producing plant, Dichapetalum cymosum, in response to mechanical wounding" @default.
• W3108661946 cites W1953283402 @default.
• W3108661946 cites W1968124667 @default.
• W3108661946 cites W1969189009 @default.
• W3108661946 cites W1969353942 @default.
• W3108661946 cites W1980931979 @default.
• W3108661946 cites W1981814861 @default.
• W3108661946 cites W1982284749 @default.
• W3108661946 cites W1983426138 @default.
• W3108661946 cites W1985326464 @default.
• W3108661946 cites W1987742384 @default.
• W3108661946 cites W1990213589 @default.
• W3108661946 cites W1994318569 @default.
• W3108661946 cites W1996287408 @default.
• W3108661946 cites W2004036573 @default.
• W3108661946 cites W2011657487 @default.
• W3108661946 cites W2019538458 @default.
• W3108661946 cites W2020677281 @default.
• W3108661946 cites W2020834342 @default.
• W3108661946 cites W2024733640 @default.
• W3108661946 cites W2039034225 @default.
• W3108661946 cites W2040564178 @default.
• W3108661946 cites W2043301499 @default.
• W3108661946 cites W2043854747 @default.
• W3108661946 cites W2048062229 @default.
• W3108661946 cites W2050018481 @default.
• W3108661946 cites W2050669688 @default.
• W3108661946 cites W2051618308 @default.
• W3108661946 cites W2060041263 @default.
• W3108661946 cites W2063022102 @default.
• W3108661946 cites W2064397275 @default.
• W3108661946 cites W2067857310 @default.
• W3108661946 cites W2067884797 @default.
• W3108661946 cites W2068048197 @default.
• W3108661946 cites W2071855613 @default.
• W3108661946 cites W2073416181 @default.
• W3108661946 cites W2075496725 @default.
• W3108661946 cites W2076648283 @default.
• W3108661946 cites W2077355527 @default.
• W3108661946 cites W2080403140 @default.
• W3108661946 cites W2080843596 @default.
• W3108661946 cites W2081239371 @default.
• W3108661946 cites W2085301398 @default.
• W3108661946 cites W2092783003 @default.
• W3108661946 cites W2102240211 @default.
• W3108661946 cites W2103017472 @default.
• W3108661946 cites W2105127214 @default.
• W3108661946 cites W2105775187 @default.
• W3108661946 cites W2111973517 @default.
• W3108661946 cites W2115594110 @default.
• W3108661946 cites W2117996359 @default.
• W3108661946 cites W2118278450 @default.
• W3108661946 cites W2124140824 @default.
• W3108661946 cites W2131271579 @default.
• W3108661946 cites W2133237718 @default.
• W3108661946 cites W2135222648 @default.
• W3108661946 cites W2148853951 @default.
• W3108661946 cites W2150518045 @default.
• W3108661946 cites W2154344286 @default.
• W3108661946 cites W2162652421 @default.
• W3108661946 cites W2168709372 @default.
• W3108661946 cites W2225956282 @default.
• W3108661946 cites W2236822143 @default.
• W3108661946 cites W2289072731 @default.
• W3108661946 cites W2316492176 @default.
• W3108661946 cites W2327192134 @default.
• W3108661946 cites W2332011239 @default.
• W3108661946 cites W2423678522 @default.
• W3108661946 cites W2499237065 @default.
• W3108661946 cites W2503680688 @default.
• W3108661946 cites W2533355719 @default.
• W3108661946 cites W2595624553 @default.
• W3108661946 cites W2605276928 @default.
• W3108661946 cites W2695244379 @default.
• W3108661946 cites W2752788000 @default.
• W3108661946 cites W2754353504 @default.
• W3108661946 cites W2795852444 @default.
• W3108661946 cites W2884574840 @default.
• W3108661946 cites W2898402099 @default.
• W3108661946 cites W2977740819 @default.
• W3108661946 cites W4294216483 @default.
• W3108661946 doi "https://doi.org/10.1038/s41598-020-77598-7" @default.
• W3108661946 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7688953" @default.
• W3108661946 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33239700" @default.
• W3108661946 hasPublicationYear "2020" @default.
• W3108661946 type Work @default.
• W3108661946 sameAs 3108661946 @default.
• W3108661946 citedByCount "7" @default.
• W3108661946 countsByYear W31086619462021 @default.

• next