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• W3109363416 abstract "Abstract Background Cotton ( Gossypium hirsutum ) is considered a fairly salt tolerant crop however, salinity can still cause significant economic losses by affecting the yield and deteriorating the fiber quality. We studied a salt-tolerant upland cotton cultivar under temporal salt stress to unfold the salt tolerance molecular mechanisms. Biochemical response to salt stress (400 mM) was measured at 0 h, 3 h, 12 h, 24 h and 48 h post stress intervals and single-molecule long-read sequencing technology from Pacific Biosciences (PacBio) combined with the unique molecular identifiers approach was used to identify differentially expressed genes (DEG). Results Antioxidant enzymes including, catalase (CAT), peroxidase (POD), superoxide dismutase (SOD) were found significantly induced under temporal salt stress, suggesting that reactive oxygen species scavenging antioxidant machinery is an essential component of salt tolerance mechanism in cotton. We identified a wealth of novel transcripts based on the PacBio long reads sequencing approach. Prolonged salt stress duration induces high number of DEGs. Significant numbers of DEGs were found under key terms related to stress pathways such as “response to oxidative stress”, “response to salt stress”, “response to water deprivation”, “cation transport”, “metal ion transport”, “superoxide dismutase”, and “reductase”. Key DEGs related to hormone (abscisic acid, ethylene and jasmonic acid) biosynthesis, ion homeostasis (CBL-interacting serine/threonine-protein kinase genes, calcium-binding proteins, potassium transporter genes, potassium channel genes, sodium/hydrogen exchanger or antiporter genes), antioxidant activity (POD, SOD, CAT, glutathione reductase), transcription factors (myeloblastosis , WRKY , Apetala 2) and cell wall modification were found highly active in response to salt stress in cotton. Expression fold change of these DEGs showed both positive and negative responses, highlighting the complex nature of salt stress tolerance mechanisms in cotton. Conclusion Collectively, this study provides a good insight into the regulatory mechanism under salt stress in cotton and lays the foundation for further improvement of salt stress tolerance." @default.
• W3109363416 created "2020-12-07" @default.
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• W3109363416 date "2020-11-27" @default.
• W3109363416 modified "2023-10-16" @default.
• W3109363416 title "Temporal salt stress-induced transcriptome alterations and regulatory mechanisms revealed by PacBio long-reads RNA sequencing in Gossypium hirsutum" @default.
• W3109363416 cites W1211423316 @default.
• W3109363416 cites W1545342045 @default.
• W3109363416 cites W1604800344 @default.
• W3109363416 cites W1799149880 @default.
• W3109363416 cites W1900001134 @default.
• W3109363416 cites W1968745634 @default.
• W3109363416 cites W1978821137 @default.
• W3109363416 cites W1995700522 @default.
• W3109363416 cites W1997937052 @default.
• W3109363416 cites W2000186624 @default.
• W3109363416 cites W2011657487 @default.
• W3109363416 cites W2024720211 @default.
• W3109363416 cites W2030625477 @default.
• W3109363416 cites W2040892942 @default.
• W3109363416 cites W2041358712 @default.
• W3109363416 cites W2042894563 @default.
• W3109363416 cites W2043336502 @default.
• W3109363416 cites W2055139270 @default.
• W3109363416 cites W2058769857 @default.
• W3109363416 cites W2060041263 @default.
• W3109363416 cites W2069375645 @default.
• W3109363416 cites W2081172835 @default.
• W3109363416 cites W2084393832 @default.
• W3109363416 cites W2084942072 @default.
• W3109363416 cites W2092605841 @default.
• W3109363416 cites W2095779053 @default.
• W3109363416 cites W2100305481 @default.
• W3109363416 cites W2102633756 @default.
• W3109363416 cites W2103386811 @default.
• W3109363416 cites W2104458054 @default.
• W3109363416 cites W2105751976 @default.
• W3109363416 cites W2105874120 @default.
• W3109363416 cites W2106678197 @default.
• W3109363416 cites W2107781914 @default.
• W3109363416 cites W2117276379 @default.
• W3109363416 cites W2123060905 @default.
• W3109363416 cites W2124606034 @default.
• W3109363416 cites W2126386203 @default.
• W3109363416 cites W2132660548 @default.
• W3109363416 cites W2132693661 @default.
• W3109363416 cites W2137057701 @default.
• W3109363416 cites W2138032440 @default.
• W3109363416 cites W2140243046 @default.
• W3109363416 cites W2142175676 @default.
• W3109363416 cites W2145800004 @default.
• W3109363416 cites W2146516445 @default.
• W3109363416 cites W2148717014 @default.
• W3109363416 cites W2152828187 @default.
• W3109363416 cites W2154140763 @default.
• W3109363416 cites W2155224484 @default.
• W3109363416 cites W2159109819 @default.
• W3109363416 cites W2163322816 @default.
• W3109363416 cites W2164138463 @default.
• W3109363416 cites W2164154943 @default.
• W3109363416 cites W2209931889 @default.
• W3109363416 cites W2231122623 @default.
• W3109363416 cites W2261268854 @default.
• W3109363416 cites W2273084189 @default.
• W3109363416 cites W2279083262 @default.
• W3109363416 cites W2295186570 @default.
• W3109363416 cites W2341069492 @default.
• W3109363416 cites W2341118325 @default.
• W3109363416 cites W2341885455 @default.
• W3109363416 cites W2474708908 @default.
• W3109363416 cites W2527891094 @default.
• W3109363416 cites W2547303460 @default.
• W3109363416 cites W2558095917 @default.
• W3109363416 cites W2619818842 @default.
• W3109363416 cites W2737995852 @default.
• W3109363416 cites W2743699200 @default.
• W3109363416 cites W2747055003 @default.
• W3109363416 cites W2755732539 @default.
• W3109363416 cites W2772780358 @default.
• W3109363416 cites W2786706225 @default.
• W3109363416 cites W2794222753 @default.
• W3109363416 cites W2808196229 @default.
• W3109363416 cites W2890702827 @default.
• W3109363416 cites W2906949511 @default.
• W3109363416 cites W2921474111 @default.
• W3109363416 cites W2997101012 @default.
• W3109363416 cites W3006067635 @default.
• W3109363416 cites W3010138192 @default.
• W3109363416 cites W3011912056 @default.
• W3109363416 cites W3012216429 @default.
• W3109363416 doi "https://doi.org/10.1186/s12864-020-07260-z" @default.
• W3109363416 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7694341" @default.

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