FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3110793588> ?p ?o ?g. }

• W3110793588 abstract "Abstract Low-temperature stress significantly affects rice growth and causes serious loss of yield in temperate and high-altitude areas of the world. Rice lacks cold tolerance (CT) at germination stage, which reduces seedling vigor, hinders crop establishment and crop growth, and even affect direct-seeded rice. A chromosome segment substitution line (CSSL) population, including 271 lines, was derived from cold-tolerant donor wild rice Y11 ( Oryza rufipogon Griff.) crossed with cold-sensitive rice variety GH998 to explore new genetic resource with CT and further investigate quantitative trait loci (QTLs) responsible for germination properties under low temperature. The germination rates of Y11 and GH998 were 95% and 73.33%, respectively, under cold stress. The range of variance of the germination rate in the CSSLs was between 0% and 98.33%. In addition, the CSSLs and parents were sequenced via whole genome resequencing. Results showed 33.46, 33.36, and 475.65 Gbp of clean data of GH998, Y11, and CSSLs, respectively. In 12 linkage groups, the general map distance was 941.49 cM, while the average map distance was 0.63 cM. On thebasis of 1484 bins, a high-density linkage map of the CSSLs was developed. The average distance of the linkage map ranged from 0.42 cM to 1.39 cM. The phenotype of CSSLs under low temperature and 615,466 single nucleotide polymorphisms (SNPs) between Y11 and GH998 were used for QTL analysis. Two QTLs, namely, low-temperature germination 8 ( qLTG8 ) and qLTG11 , were responsible for the germination ability under low temperature in rice. qLTG8 was mapped on chromosome 8, and it explained 14.55% of the total phenotypic variation explained (PVE) during the germination stage. qLTG8 was in 195.5 kb, and 32 genes were predicted based on the Rice Genome Annotation Project. qLTG11 was located on chromosome 11, and it explained 14.31% of the total PVE during the germination stage. qLTG11 was mapped at a narrow distance in 78.83 kb, and only 12 genes fall within this range according to the Rice Genome Annotation Project. The expression patterns of these 32 genes in the qLTG8 region demonstrated that LOC_Os08g01120 , LOC_Os08g01140 , LOC_Os08g01390 , LOC_Os08g01170 , and LOC_Os08g01380 were highly induced by cold stress in Y11 compared with GH998. The expression patterns of 12 genes in the qLTG11 region suggested that LOC_Os11g32880 and LOC_Os11g32940 were highly induced by cold stress in Y11 compared with GH998. This study provides an effective method, i.e., constructing CSSLs of wild rice, to explore excellent genes of wild rice and create new genetic resources. The results also provide a basis for identifying the genes underlying qLTG8 and qLTG11 , indicating that QTL could be used for genetic improvement of CT in cultivar rice." @default.
• W3110793588 created "2020-12-21" @default.
• W3110793588 creator A5002531058 @default.
• W3110793588 creator A5007739056 @default.
• W3110793588 creator A5010738468 @default.
• W3110793588 creator A5017330277 @default.
• W3110793588 creator A5023977887 @default.
• W3110793588 creator A5025441546 @default.
• W3110793588 creator A5040005368 @default.
• W3110793588 creator A5055348561 @default.
• W3110793588 creator A5067839001 @default.
• W3110793588 creator A5075719659 @default.
• W3110793588 creator A5084392793 @default.
• W3110793588 date "2020-11-05" @default.
• W3110793588 modified "2023-10-16" @default.
• W3110793588 title "Mapping Quantitative Trait Loci for Cold Tolerance in Rice under Germination Stage by Whole Genome Resequencing and Analysis of Candidate Genes" @default.
• W3110793588 cites W1955229900 @default.
• W3110793588 cites W1984239201 @default.
• W3110793588 cites W2077346300 @default.
• W3110793588 cites W2119180969 @default.
• W3110793588 cites W2521251345 @default.
• W3110793588 cites W2554872799 @default.
• W3110793588 cites W2587324130 @default.
• W3110793588 cites W2590844278 @default.
• W3110793588 cites W2745335996 @default.
• W3110793588 cites W2762120614 @default.
• W3110793588 cites W2780869931 @default.
• W3110793588 cites W2912513382 @default.
• W3110793588 cites W2914117435 @default.
• W3110793588 cites W2916434842 @default.
• W3110793588 cites W2944833373 @default.
• W3110793588 cites W2982189224 @default.
• W3110793588 cites W2990148329 @default.
• W3110793588 cites W3085551064 @default.
• W3110793588 doi "https://doi.org/10.21203/rs.3.rs-101299/v1" @default.
• W3110793588 hasPublicationYear "2020" @default.
• W3110793588 type Work @default.
• W3110793588 sameAs 3110793588 @default.
• W3110793588 citedByCount "1" @default.
• W3110793588 countsByYear W31107935882022 @default.
• W3110793588 crossrefType "posted-content" @default.
• W3110793588 hasAuthorship W3110793588A5002531058 @default.
• W3110793588 hasAuthorship W3110793588A5007739056 @default.
• W3110793588 hasAuthorship W3110793588A5010738468 @default.
• W3110793588 hasAuthorship W3110793588A5017330277 @default.
• W3110793588 hasAuthorship W3110793588A5023977887 @default.
• W3110793588 hasAuthorship W3110793588A5025441546 @default.
• W3110793588 hasAuthorship W3110793588A5040005368 @default.
• W3110793588 hasAuthorship W3110793588A5055348561 @default.
• W3110793588 hasAuthorship W3110793588A5067839001 @default.
• W3110793588 hasAuthorship W3110793588A5075719659 @default.
• W3110793588 hasAuthorship W3110793588A5084392793 @default.
• W3110793588 hasBestOaLocation W31107935881 @default.
• W3110793588 hasConcept C100701293 @default.
• W3110793588 hasConcept C104317684 @default.
• W3110793588 hasConcept C135763542 @default.
• W3110793588 hasConcept C137580998 @default.
• W3110793588 hasConcept C142870003 @default.
• W3110793588 hasConcept C144024400 @default.
• W3110793588 hasConcept C144027150 @default.
• W3110793588 hasConcept C149923435 @default.
• W3110793588 hasConcept C153209595 @default.
• W3110793588 hasConcept C2776096895 @default.
• W3110793588 hasConcept C2778543611 @default.
• W3110793588 hasConcept C2781450044 @default.
• W3110793588 hasConcept C2908647359 @default.
• W3110793588 hasConcept C54355233 @default.
• W3110793588 hasConcept C6557445 @default.
• W3110793588 hasConcept C81941488 @default.
• W3110793588 hasConcept C86803240 @default.
• W3110793588 hasConceptScore W3110793588C100701293 @default.
• W3110793588 hasConceptScore W3110793588C104317684 @default.
• W3110793588 hasConceptScore W3110793588C135763542 @default.
• W3110793588 hasConceptScore W3110793588C137580998 @default.
• W3110793588 hasConceptScore W3110793588C142870003 @default.
• W3110793588 hasConceptScore W3110793588C144024400 @default.
• W3110793588 hasConceptScore W3110793588C144027150 @default.
• W3110793588 hasConceptScore W3110793588C149923435 @default.
• W3110793588 hasConceptScore W3110793588C153209595 @default.
• W3110793588 hasConceptScore W3110793588C2776096895 @default.
• W3110793588 hasConceptScore W3110793588C2778543611 @default.
• W3110793588 hasConceptScore W3110793588C2781450044 @default.
• W3110793588 hasConceptScore W3110793588C2908647359 @default.
• W3110793588 hasConceptScore W3110793588C54355233 @default.
• W3110793588 hasConceptScore W3110793588C6557445 @default.
• W3110793588 hasConceptScore W3110793588C81941488 @default.
• W3110793588 hasConceptScore W3110793588C86803240 @default.
• W3110793588 hasLocation W31107935881 @default.
• W3110793588 hasOpenAccess W3110793588 @default.
• W3110793588 hasPrimaryLocation W31107935881 @default.
• W3110793588 hasRelatedWork W2038641742 @default.
• W3110793588 hasRelatedWork W2155766133 @default.
• W3110793588 hasRelatedWork W2207120238 @default.
• W3110793588 hasRelatedWork W2377123220 @default.
• W3110793588 hasRelatedWork W2380528078 @default.
• W3110793588 hasRelatedWork W2499945022 @default.
• W3110793588 hasRelatedWork W2971793294 @default.
• W3110793588 hasRelatedWork W3017812922 @default.
• W3110793588 hasRelatedWork W4205762774 @default.
• W3110793588 hasRelatedWork W744236744 @default.

• next