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- W3119128685 abstract "Abstract Background Host and niche shifts are a source of genomic and phenotypic diversification as evidenced in parasitism. Exemplary is core metabolism reduction as parasites adapt to a particular host, while the accessory genome often maintains a high degree of diversification. However, selective pressures acting on the genome of organisms that have undergone lifestyle or host change have not been fully investigated. Results Here, we developed a comparative genomics approach to study underlying adaptive trends in oomycetes, a eukaryotic phylum with a broad range of economically important plant and animal parasitic lifestyles. Our analysis reveals converging evolution on biological processes for oomycetes that have similar lifestyle. Besides, we find that certain functions, in particular carbohydrate metabolism, transport, and signaling, are important for host and environmental adaption in oomycetes. Discussion Given the high correlation between lifestyle and genome properties in our oomycete dataset and the convergent evolution of fungal and oomycete genomes, we have developed a model that predicts plant pathogen lifestyles with high accuracy based on functional annotations. Understanding how genomes and selective pressures correlate with lifestyle may be crucial to identify new emerging diseases and pandemic threats." @default.
- W3119128685 created "2021-01-18" @default.
- W3119128685 creator A5022857017 @default.
- W3119128685 creator A5059055007 @default.
- W3119128685 date "2021-01-13" @default.
- W3119128685 modified "2023-10-16" @default.
- W3119128685 title "Predicting lifestyle and host from positive selection data and genome properties in oomycetes" @default.
- W3119128685 cites W1006681946 @default.
- W3119128685 cites W118013854 @default.
- W3119128685 cites W1836237558 @default.
- W3119128685 cites W1969966687 @default.
- W3119128685 cites W1972895163 @default.
- W3119128685 cites W1974169319 @default.
- W3119128685 cites W1979129439 @default.
- W3119128685 cites W1979835060 @default.
- W3119128685 cites W1986173586 @default.
- W3119128685 cites W1987584310 @default.
- W3119128685 cites W2003159277 @default.
- W3119128685 cites W2004262776 @default.
- W3119128685 cites W2004631328 @default.
- W3119128685 cites W2006291275 @default.
- W3119128685 cites W2012950895 @default.
- W3119128685 cites W2014047103 @default.
- W3119128685 cites W2016632462 @default.
- W3119128685 cites W2022927779 @default.
- W3119128685 cites W2026583751 @default.
- W3119128685 cites W2031611770 @default.
- W3119128685 cites W2037045595 @default.
- W3119128685 cites W2046183549 @default.
- W3119128685 cites W2050183857 @default.
- W3119128685 cites W2058795503 @default.
- W3119128685 cites W2058818256 @default.
- W3119128685 cites W2060425093 @default.
- W3119128685 cites W2072629599 @default.
- W3119128685 cites W2075635829 @default.
- W3119128685 cites W2076617993 @default.
- W3119128685 cites W2079660067 @default.
- W3119128685 cites W2085138827 @default.
- W3119128685 cites W2094201044 @default.
- W3119128685 cites W2095469406 @default.
- W3119128685 cites W2098155220 @default.
- W3119128685 cites W2100477704 @default.
- W3119128685 cites W2101000074 @default.
- W3119128685 cites W2101291993 @default.
- W3119128685 cites W2103017472 @default.
- W3119128685 cites W2105404339 @default.
- W3119128685 cites W2107850759 @default.
- W3119128685 cites W2108512869 @default.
- W3119128685 cites W2110417468 @default.
- W3119128685 cites W2111233616 @default.
- W3119128685 cites W2114854972 @default.
- W3119128685 cites W2116111392 @default.
- W3119128685 cites W2116423958 @default.
- W3119128685 cites W2120077181 @default.
- W3119128685 cites W2131005949 @default.
- W3119128685 cites W2132671821 @default.
- W3119128685 cites W2143157299 @default.
- W3119128685 cites W2144129151 @default.
- W3119128685 cites W2147838321 @default.
- W3119128685 cites W2153009023 @default.
- W3119128685 cites W2154770881 @default.
- W3119128685 cites W2156911088 @default.
- W3119128685 cites W2160506991 @default.
- W3119128685 cites W2160619010 @default.
- W3119128685 cites W2160941537 @default.
- W3119128685 cites W2166125670 @default.
- W3119128685 cites W2168151743 @default.
- W3119128685 cites W2169123200 @default.
- W3119128685 cites W2170593005 @default.
- W3119128685 cites W2171799027 @default.
- W3119128685 cites W2173732482 @default.
- W3119128685 cites W2191852077 @default.
- W3119128685 cites W2279686187 @default.
- W3119128685 cites W2337886504 @default.
- W3119128685 cites W2341354795 @default.
- W3119128685 cites W2342572278 @default.
- W3119128685 cites W2530898509 @default.
- W3119128685 cites W2585957367 @default.
- W3119128685 cites W2586852937 @default.
- W3119128685 cites W2615428592 @default.
- W3119128685 cites W2775434008 @default.
- W3119128685 cites W2790546589 @default.
- W3119128685 cites W2792481135 @default.
- W3119128685 cites W2803118342 @default.
- W3119128685 cites W2803400887 @default.
- W3119128685 cites W2845591014 @default.
- W3119128685 cites W2898548494 @default.
- W3119128685 cites W2898848148 @default.
- W3119128685 cites W2909230905 @default.
- W3119128685 cites W2911684408 @default.
- W3119128685 cites W2935811631 @default.
- W3119128685 cites W2949788437 @default.
- W3119128685 cites W2950595506 @default.
- W3119128685 cites W2966655093 @default.
- W3119128685 cites W2982454219 @default.
- W3119128685 cites W2994139926 @default.
- W3119128685 cites W2998585653 @default.
- W3119128685 cites W3000375570 @default.
- W3119128685 cites W3002602408 @default.
- W3119128685 cites W3003540569 @default.