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• W3122324474 abstract "Abstract Transcription Factors (TFs) are proteins that control the flow of genetic information by regulating cellular gene expression. Here we describe PredicTF, a first platform supporting the prediction and classification of novel bacterial TF in complex microbial communities. We evaluated PredicTF using a two-step approach. First, we tested PredictTF’s ability to predict TFs for the genome of an environmental isolate. In the second evaluation step, PredicTF was used to predict TFs in a metagenome and 11 metatranscriptomes recovered from a community performing anaerobic ammonium oxidation (anammox) in a bioreactor. PredicTF is open source pipeline available at https://github.com/mdsufz/PredicTF ." @default.
• W3122324474 created "2021-02-01" @default.
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• W3122324474 date "2021-01-28" @default.
• W3122324474 modified "2023-10-18" @default.
• W3122324474 title "PredicTF: a tool to predict bacterial transcription factors in complex microbial communities" @default.
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• W3122324474 doi "https://doi.org/10.1101/2021.01.28.428666" @default.
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