FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3126915857> ?p ?o ?g. }

• W3126915857 abstract "ABSTRACT Dickeya zeae , a bacterial plant pathogen in the family Pectobacteriaceae, is responsible for a wide range of diseases on potato, maize, rice, banana, pineapple, taro and ornamentals and significantly reduces crop production; D. zeae causes soft rot of taro ( Colocasia esculenta ) and heart rot of pineapple ( Ananas comosus ). In this study, we used Pacific Biosciences to sequence two high quality complete genomes of novel strains of D. zeae : PL65 (size - 4.74997 MB; depth - 701; GC - 53.3%) and A5410 (size - 4.7792 MB; depth - 558; GC - 53.6%) isolated from economically important Hawaiian crops, taro and pineapple, respectively. Additional complete genomes of D. zeae representing two additional hosts (rice and banana), and other species for taxonomic comparison, were retrieved from the NCBI GenBank genome database. The genomic analyses indicated truncated type III and IV secretion systems (T3SS and T4SS) in the taro strain, which only harbors 1 and 2 genes of T3SS and T4SS, respectively, and showed high heterogeneity in the type VI secretion system. Unlike the EC1 strain, neither the PL65 nor the A5410 genome harbors the zeamine biosynthesis gene cluster, which plays a key role in bacterial virulence. The ANI and dDDH percentages between the two genomes were 94.47 and 57.00, respectively. In this study, we compared major virulence factors (plant cell wall-degrading extracellular enzymes and protease) produced by D. zeae strains and virulence ability on taro corms and pineapple. Both strains produced protease, pectate lyases and cellulases but no significant quantitative differences were observed (p>0.05) among the strains. All the strains produced symptoms on taro corms and pineapple leaves. Strain PL65 developed symptoms faster than the others. Our study highlights genetic constituents of pathogenicity determinants and genomic heterogeneity that will help understand the virulence mechanisms and aggressiveness of this plant pathogen." @default.
• W3126915857 created "2021-02-15" @default.
• W3126915857 creator A5008745466 @default.
• W3126915857 creator A5020087250 @default.
• W3126915857 creator A5023354012 @default.
• W3126915857 creator A5051751723 @default.
• W3126915857 creator A5054959768 @default.
• W3126915857 creator A5073031910 @default.
• W3126915857 creator A5082511424 @default.
• W3126915857 date "2021-01-29" @default.
• W3126915857 modified "2023-10-01" @default.
• W3126915857 title "Genomic and phenotypic biology of novel strains of Dickeya zeae isolated from pineapple and taro in Hawaii: insights into genome plasticity, pathogenicity, and virulence determinants" @default.
• W3126915857 cites W1489525483 @default.
• W3126915857 cites W1650999645 @default.
• W3126915857 cites W1749553601 @default.
• W3126915857 cites W1915578613 @default.
• W3126915857 cites W1968252650 @default.
• W3126915857 cites W1970547962 @default.
• W3126915857 cites W1986708244 @default.
• W3126915857 cites W2005183289 @default.
• W3126915857 cites W2008856488 @default.
• W3126915857 cites W2015137458 @default.
• W3126915857 cites W2041257508 @default.
• W3126915857 cites W2041807869 @default.
• W3126915857 cites W2056848762 @default.
• W3126915857 cites W2060835320 @default.
• W3126915857 cites W2062125963 @default.
• W3126915857 cites W2063362904 @default.
• W3126915857 cites W2063756105 @default.
• W3126915857 cites W2068451917 @default.
• W3126915857 cites W2073925485 @default.
• W3126915857 cites W2078403848 @default.
• W3126915857 cites W2085960153 @default.
• W3126915857 cites W2090365745 @default.
• W3126915857 cites W2093380630 @default.
• W3126915857 cites W2094288404 @default.
• W3126915857 cites W2096404721 @default.
• W3126915857 cites W2104272822 @default.
• W3126915857 cites W2105785754 @default.
• W3126915857 cites W2106728647 @default.
• W3126915857 cites W2107109905 @default.
• W3126915857 cites W2109951903 @default.
• W3126915857 cites W2110671918 @default.
• W3126915857 cites W2114853012 @default.
• W3126915857 cites W2116206245 @default.
• W3126915857 cites W2119888547 @default.
• W3126915857 cites W2121055398 @default.
• W3126915857 cites W2123902931 @default.
• W3126915857 cites W2127036970 @default.
• W3126915857 cites W2128481182 @default.
• W3126915857 cites W2128998388 @default.
• W3126915857 cites W2129978006 @default.
• W3126915857 cites W2130101359 @default.
• W3126915857 cites W2131257468 @default.
• W3126915857 cites W2135439260 @default.
• W3126915857 cites W2135554057 @default.
• W3126915857 cites W2137840411 @default.
• W3126915857 cites W2155628075 @default.
• W3126915857 cites W2158847524 @default.
• W3126915857 cites W2160128789 @default.
• W3126915857 cites W2163241233 @default.
• W3126915857 cites W2169172728 @default.
• W3126915857 cites W2174939116 @default.
• W3126915857 cites W2175094144 @default.
• W3126915857 cites W2214186913 @default.
• W3126915857 cites W2318662933 @default.
• W3126915857 cites W2336876349 @default.
• W3126915857 cites W2470052926 @default.
• W3126915857 cites W2470979746 @default.
• W3126915857 cites W2519525355 @default.
• W3126915857 cites W2559133556 @default.
• W3126915857 cites W2609551972 @default.
• W3126915857 cites W2610656577 @default.
• W3126915857 cites W2626743870 @default.
• W3126915857 cites W2759073474 @default.
• W3126915857 cites W2781763834 @default.
• W3126915857 cites W2781800146 @default.
• W3126915857 cites W2790921906 @default.
• W3126915857 cites W2792803089 @default.
• W3126915857 cites W2803245377 @default.
• W3126915857 cites W2896322708 @default.
• W3126915857 cites W2912915419 @default.
• W3126915857 cites W2944076458 @default.
• W3126915857 cites W2949027352 @default.
• W3126915857 cites W3036460926 @default.
• W3126915857 cites W3040428718 @default.
• W3126915857 cites W3093710922 @default.
• W3126915857 cites W4231249821 @default.
• W3126915857 cites W4236236547 @default.
• W3126915857 cites W54863015 @default.
• W3126915857 doi "https://doi.org/10.1101/2021.01.28.428661" @default.
• W3126915857 hasPublicationYear "2021" @default.
• W3126915857 type Work @default.
• W3126915857 sameAs 3126915857 @default.
• W3126915857 citedByCount "0" @default.
• W3126915857 crossrefType "posted-content" @default.
• W3126915857 hasAuthorship W3126915857A5008745466 @default.
• W3126915857 hasAuthorship W3126915857A5020087250 @default.
• W3126915857 hasAuthorship W3126915857A5023354012 @default.
• W3126915857 hasAuthorship W3126915857A5051751723 @default.

• next