FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3128134680> ?p ?o ?g. }

• W3128134680 abstract "Abstract Background Legume species are an important plant model because of their protein-rich physiology. The adaptability and productivity of legumes are limited by major biotic and abiotic stresses. Responses to these stresses directly involve plasma membrane receptor proteins known as receptor-like kinases and receptor-like proteins. Evaluating the homology relations among RLK and RLP for seven legume species, and exploring their presence among synteny blocks allow an increased understanding of evolutionary relations, physical position, and chromosomal distribution in related species and their shared roles in stress responses. Results Typically, a high proportion of RLK and RLP legume proteins belong to orthologous clusters, which is confirmed in this study, where between 66 to 90% of the RLKs and RLPs per legume species were classified in orthologous clusters. One-third of the evaluated syntenic blocks had shared RLK/RLP genes among both legumes and non-legumes. Among the legumes, between 75 and 98% of the RLK/RLP were present in syntenic blocks. The distribution of chromosomal segments between Phaseolus vulgaris and Vigna unguiculata , two species that diverged ~ 8 mya, were highly similar. Among the RLK/RLP synteny clusters, seven experimentally validated resistance RLK/RLP genes were identified in syntenic blocks. The RLK resistant genes FLS2, BIR2, ERECTA, IOS1, and AtSERK1 from Arabidopsis and SLSERK1 from Solanum lycopersicum were present in different pairwise syntenic blocks among the legume species. Meanwhile, only the LYM1- RLP resistant gene from Arabidopsis shared a syntenic blocks with Glycine max . Conclusions The orthology analysis of the RLK and RLP suggests a dynamic evolution in the legume family, with between 66 to 85% of RLK and 83 to 88% of RLP belonging to orthologous clusters among the species evaluated. In fact, for the 10-species comparison, a lower number of singleton proteins were reported among RLP compared to RLK, suggesting that RLP positions are more physically conserved compared to RLK. The identification of RLK and RLP genes among the synteny blocks in legumes revealed multiple highly conserved syntenic blocks on multiple chromosomes. Additionally, the analysis suggests that P. vulgaris is an appropriate anchor species for comparative genomics among legumes." @default.
• W3128134680 created "2021-02-15" @default.
• W3128134680 creator A5008841645 @default.
• W3128134680 creator A5021156874 @default.
• W3128134680 creator A5027374469 @default.
• W3128134680 date "2021-02-10" @default.
• W3128134680 modified "2023-10-08" @default.
• W3128134680 title "Orthology and synteny analysis of receptor-like kinases “RLK” and receptor-like proteins “RLP” in legumes" @default.
• W3128134680 cites W1484660603 @default.
• W3128134680 cites W1487576016 @default.
• W3128134680 cites W1774067764 @default.
• W3128134680 cites W1964602476 @default.
• W3128134680 cites W1979835060 @default.
• W3128134680 cites W1994145712 @default.
• W3128134680 cites W1994602890 @default.
• W3128134680 cites W1998728564 @default.
• W3128134680 cites W1999347744 @default.
• W3128134680 cites W2008856488 @default.
• W3128134680 cites W2011204117 @default.
• W3128134680 cites W2011929210 @default.
• W3128134680 cites W2012986985 @default.
• W3128134680 cites W2020134788 @default.
• W3128134680 cites W2021044098 @default.
• W3128134680 cites W2022442996 @default.
• W3128134680 cites W2025007989 @default.
• W3128134680 cites W2035628732 @default.
• W3128134680 cites W2047667092 @default.
• W3128134680 cites W2049131915 @default.
• W3128134680 cites W2056871145 @default.
• W3128134680 cites W2057857382 @default.
• W3128134680 cites W2062763536 @default.
• W3128134680 cites W2068307748 @default.
• W3128134680 cites W2080177252 @default.
• W3128134680 cites W2080693057 @default.
• W3128134680 cites W2080943990 @default.
• W3128134680 cites W2094334461 @default.
• W3128134680 cites W2096314002 @default.
• W3128134680 cites W2096314275 @default.
• W3128134680 cites W2097123946 @default.
• W3128134680 cites W2106208020 @default.
• W3128134680 cites W2107915254 @default.
• W3128134680 cites W2110398029 @default.
• W3128134680 cites W2117575205 @default.
• W3128134680 cites W2118077323 @default.
• W3128134680 cites W2126045294 @default.
• W3128134680 cites W2126423997 @default.
• W3128134680 cites W2135230723 @default.
• W3128134680 cites W2139838547 @default.
• W3128134680 cites W2141292707 @default.
• W3128134680 cites W2142476450 @default.
• W3128134680 cites W2152466204 @default.
• W3128134680 cites W2156125289 @default.
• W3128134680 cites W2159266221 @default.
• W3128134680 cites W2159368556 @default.
• W3128134680 cites W2160034210 @default.
• W3128134680 cites W2161263207 @default.
• W3128134680 cites W2162515800 @default.
• W3128134680 cites W2162779104 @default.
• W3128134680 cites W2165779690 @default.
• W3128134680 cites W2166115538 @default.
• W3128134680 cites W2178189890 @default.
• W3128134680 cites W2225494897 @default.
• W3128134680 cites W2281248875 @default.
• W3128134680 cites W2400879191 @default.
• W3128134680 cites W2474525766 @default.
• W3128134680 cites W2511554536 @default.
• W3128134680 cites W2535123508 @default.
• W3128134680 cites W2548365387 @default.
• W3128134680 cites W2609499265 @default.
• W3128134680 cites W2782201756 @default.
• W3128134680 cites W2936845521 @default.
• W3128134680 cites W2952059076 @default.
• W3128134680 cites W2952105401 @default.
• W3128134680 cites W2996843154 @default.
• W3128134680 cites W3038394954 @default.
• W3128134680 doi "https://doi.org/10.1186/s12864-021-07384-w" @default.
• W3128134680 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7874474" @default.
• W3128134680 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33568053" @default.
• W3128134680 hasPublicationYear "2021" @default.
• W3128134680 type Work @default.
• W3128134680 sameAs 3128134680 @default.
• W3128134680 citedByCount "4" @default.
• W3128134680 countsByYear W31281346802021 @default.
• W3128134680 countsByYear W31281346802022 @default.
• W3128134680 countsByYear W31281346802023 @default.
• W3128134680 crossrefType "journal-article" @default.
• W3128134680 hasAuthorship W3128134680A5008841645 @default.
• W3128134680 hasAuthorship W3128134680A5021156874 @default.
• W3128134680 hasAuthorship W3128134680A5027374469 @default.
• W3128134680 hasBestOaLocation W31281346801 @default.
• W3128134680 hasConcept C104317684 @default.
• W3128134680 hasConcept C141231307 @default.
• W3128134680 hasConcept C143065580 @default.
• W3128134680 hasConcept C2779491563 @default.
• W3128134680 hasConcept C33009525 @default.
• W3128134680 hasConcept C53702515 @default.
• W3128134680 hasConcept C54355233 @default.
• W3128134680 hasConcept C78458016 @default.
• W3128134680 hasConcept C86803240 @default.
• W3128134680 hasConceptScore W3128134680C104317684 @default.

• next