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- W3129463312 abstract "Abstract We consider the $k$ mismatches version of approximate string matching for a single pattern and multiple patterns. For these problems, we present new algorithms utilizing the single instruction multiple data (SIMD) instruction set extensions for patterns of up to 32 characters. We apply SIMD computation in three ways: in counting of mismatches, in comparison of substrings and in calculation of fingerprints. We show the competitiveness of the new algorithms by practical experiments." @default.
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- W3129463312 date "2021-02-23" @default.
- W3129463312 modified "2023-10-15" @default.
- W3129463312 title "Approximate String Matching with SIMD" @default.
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- W3129463312 doi "https://doi.org/10.1093/comjnl/bxaa193" @default.
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