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• W3137300448 abstract "Abstract Background Tartary buckwheat seed development is an extremely complex process involving many gene regulatory pathways. MicroRNAs (miRNAs) have been identified as the important negative regulators of gene expression and performed crucial regulatory roles in various plant biological processes. However, whether miRNAs participate in Tartary buckwheat seed development remains unexplored. Results In this study, we first identified 26 miRNA biosynthesis genes in the Tartary buckwheat genome and described their phylogeny and expression profiling. Then we performed small RNA (sRNA) sequencing for Tartary buckwheat seeds at three developmental stages to identify the miRNAs associated with seed development. In total, 230 miRNAs, including 101 conserved and 129 novel miRNAs, were first identified in Tartary buckwheat, and 3268 target genes were successfully predicted. Among these miRNAs, 76 exhibited differential expression during seed development, and 1534 target genes which correspond to 74 differentially expressed miRNAs (DEMs) were identified. Based on integrated analysis of DEMs and their targets expression, 65 miRNA-mRNA interaction pairs (25 DEMs corresponding to 65 target genes) were identified that exhibited significantly opposite expression during Tartary buckwheat seed development, and 6 of the miRNA-mRNA pairs were further verified by quantitative real-time polymerase chain reaction (qRT-PCR) and ligase-mediated rapid amplification of 5′ cDNA ends (5′-RLM-RACE). Functional annotation of the 65 target mRNAs showed that 56 miRNA-mRNA interaction pairs major involved in cell differentiation and proliferation, cell elongation, hormones response, organogenesis, embryo and endosperm development, seed size, mineral elements transport, and flavonoid biosynthesis, which indicated that they are the key miRNA-mRNA pairs for Tartary buckwheat seed development. Conclusions Our findings provided insights for the first time into miRNA-mediated regulatory pathways in Tartary buckwheat seed development and suggested that miRNAs play important role in Tartary buckwheat seed development. These findings will be help to study the roles and regulatory mechanism of miRNAs in Tartary buckwheat seed development." @default.
• W3137300448 created "2021-03-29" @default.
• W3137300448 creator A5005589952 @default.
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• W3137300448 date "2021-03-09" @default.
• W3137300448 modified "2023-10-13" @default.
• W3137300448 title "Integrated microRNA and transcriptome profiling reveal key miRNA-mRNA interaction pairs associated with seed development in Tartary buckwheat (Fagopyrum tataricum)" @default.
• W3137300448 cites W1191273493 @default.
• W3137300448 cites W1901168035 @default.
• W3137300448 cites W1965514968 @default.
• W3137300448 cites W1967761184 @default.
• W3137300448 cites W1975437957 @default.
• W3137300448 cites W1988107604 @default.
• W3137300448 cites W1997902480 @default.
• W3137300448 cites W2005767697 @default.
• W3137300448 cites W2006857376 @default.
• W3137300448 cites W2007707667 @default.
• W3137300448 cites W2036279977 @default.
• W3137300448 cites W2038384106 @default.
• W3137300448 cites W2047703340 @default.
• W3137300448 cites W2050298867 @default.
• W3137300448 cites W2065680270 @default.
• W3137300448 cites W2069812909 @default.
• W3137300448 cites W2078613795 @default.
• W3137300448 cites W2088498620 @default.
• W3137300448 cites W2105321843 @default.
• W3137300448 cites W2130305733 @default.
• W3137300448 cites W2135015580 @default.
• W3137300448 cites W2135435176 @default.
• W3137300448 cites W2136280642 @default.
• W3137300448 cites W2139582953 @default.
• W3137300448 cites W2159507483 @default.
• W3137300448 cites W2162291795 @default.
• W3137300448 cites W2164473028 @default.
• W3137300448 cites W2170994530 @default.
• W3137300448 cites W2274522048 @default.
• W3137300448 cites W2324700256 @default.
• W3137300448 cites W2336947314 @default.
• W3137300448 cites W2340792251 @default.
• W3137300448 cites W2410068980 @default.
• W3137300448 cites W2476905916 @default.
• W3137300448 cites W2595905721 @default.
• W3137300448 cites W2611788492 @default.
• W3137300448 cites W2751551482 @default.
• W3137300448 cites W2752852083 @default.
• W3137300448 cites W2755926329 @default.
• W3137300448 cites W2756322014 @default.
• W3137300448 cites W2756596429 @default.
• W3137300448 cites W2762755099 @default.
• W3137300448 cites W2765221849 @default.
• W3137300448 cites W2776616869 @default.
• W3137300448 cites W2776902138 @default.
• W3137300448 cites W2783753653 @default.
• W3137300448 cites W2793304201 @default.
• W3137300448 cites W2795457002 @default.
• W3137300448 cites W2805573344 @default.
• W3137300448 cites W2889422348 @default.
• W3137300448 cites W2889810789 @default.
• W3137300448 cites W2891738766 @default.
• W3137300448 cites W2897132682 @default.
• W3137300448 cites W2898440040 @default.
• W3137300448 cites W2898525403 @default.
• W3137300448 cites W2907805756 @default.
• W3137300448 cites W2915869563 @default.
• W3137300448 cites W2921080859 @default.
• W3137300448 cites W2944520962 @default.
• W3137300448 cites W2944989272 @default.
• W3137300448 cites W2962979819 @default.
• W3137300448 cites W2972180526 @default.
• W3137300448 cites W2972338588 @default.
• W3137300448 cites W2972889883 @default.
• W3137300448 cites W2973351229 @default.
• W3137300448 cites W2979851787 @default.
• W3137300448 cites W2997942058 @default.
• W3137300448 cites W2998073026 @default.
• W3137300448 cites W3007849409 @default.
• W3137300448 cites W3012240256 @default.
• W3137300448 cites W3012739343 @default.
• W3137300448 cites W3022865643 @default.
• W3137300448 cites W3036319615 @default.
• W3137300448 cites W3038339102 @default.
• W3137300448 cites W3088487515 @default.
• W3137300448 cites W317364386 @default.
• W3137300448 cites W987366515 @default.
• W3137300448 doi "https://doi.org/10.1186/s12870-021-02914-w" @default.
• W3137300448 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7941931" @default.
• W3137300448 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33750309" @default.
• W3137300448 hasPublicationYear "2021" @default.
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