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• W3137540342 abstract "The comma butterfly (Polygonia c-album, Nymphalidae, Lepidoptera) is a model insect species, most notably in the study of phenotypic plasticity and plant-insect coevolutionary interactions. In order to facilitate the integration of genomic tools with a diverse body of ecological and evolutionary research, we assembled the genome of a Swedish comma using 10X sequencing, scaffolding with matepair data, genome polishing, and assignment to linkage groups using a high-density linkage map. The resulting genome is 373 Mb in size, with a scaffold N50 of 11.7 Mb and contig N50 of 11,2Mb. The genome contained 90.1% of single-copy Lepidopteran orthologs in a BUSCO analysis of 5,286 genes. A total of 21,004 gene-models were annotated on the genome using RNA-Seq data from larval and adult tissue in combination with proteins from the Arthropoda database, resulting in a high-quality annotation for which functional annotations were generated. We further documented the quality of the chromosomal assembly via synteny assessment with Melitaea cinxia. The resulting annotated, chromosome-level genome will provide an important resource for investigating coevolutionary dynamics and comparative analyses in Lepidoptera." @default.
• W3137540342 created "2021-03-29" @default.
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• W3137540342 date "2021-03-22" @default.
• W3137540342 modified "2023-09-23" @default.
• W3137540342 title "Chromosome Level Assembly of the Comma Butterfly (<i>Polygonia c-album</i>)" @default.
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• W3137540342 doi "https://doi.org/10.1093/gbe/evab054" @default.
• W3137540342 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8140205" @default.
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• W3137540342 hasPublicationYear "2021" @default.
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