FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3140226293> ?p ?o ?g. }

• W3140226293 abstract "Abstract Most molecularly characterized plant resistance genes (R genes) belong to the nucleotide-binding-site-leucine-rich-repeat (NLR) receptor family and are prone to duplication and transposition with high sequence diversity. In this family, the Vat gene in melon is one of the few R genes known for conferring resistance to insect, i.e., Aphis gossypii , but it has been misassembled and/or mispredicted in the whole genomes of Cucurbits. We examined 14 genomic regions (about 400 kb) derived from long-read assemblies spanning Vat -related genes in Cucumis melo , Cucumis sativus, Citrullus lanatus, Benincasa hispida, Cucurbita argyrosperma , and Momordica charantia . We built the phylogeny of those genes. Investigating the paleohistory of the Vat gene cluster, we revealed a step by step process beginning from a common ancestry in cucurbits older than 50 my. We highlighted Vat exclusively in the Cucumis genera, which diverged about 20 my ago. We then focused on melon, evaluating a minimum duplication rate of Vat in 80 wild and cultivated melon lines using generalist primers; our results suggested that duplication started before melon domestication. The phylogeny of 44 Vat-CDS obtained from 21 melon lines revealed gain and loss of leucine-rich-repeat domains along diversification. Altogether, we revealed the high putative recognition scale offered in melon based on a combination of SNPs, number of leucine-rich-repeat domains within each homolog and number of homologs within each cluster that might jointly confer resistance to a large pest and pathogen spectrum. Based on our findings, we propose possible avenues for breeding programs." @default.
• W3140226293 created "2021-04-13" @default.
• W3140226293 creator A5011572988 @default.
• W3140226293 creator A5019699600 @default.
• W3140226293 creator A5028597798 @default.
• W3140226293 creator A5037009251 @default.
• W3140226293 creator A5038658789 @default.
• W3140226293 creator A5042884422 @default.
• W3140226293 creator A5045749862 @default.
• W3140226293 creator A5050759120 @default.
• W3140226293 creator A5077164569 @default.
• W3140226293 creator A5083447538 @default.
• W3140226293 creator A5090299834 @default.
• W3140226293 date "2021-04-01" @default.
• W3140226293 modified "2023-09-25" @default.
• W3140226293 title "Building a cluster of NLR genes conferring resistance to pests and pathogens: the story of the Vat gene cluster in cucurbits" @default.
• W3140226293 cites W1494284268 @default.
• W3140226293 cites W1528840025 @default.
• W3140226293 cites W1964570305 @default.
• W3140226293 cites W1976173970 @default.
• W3140226293 cites W1977557566 @default.
• W3140226293 cites W1996184168 @default.
• W3140226293 cites W2021341670 @default.
• W3140226293 cites W2029157309 @default.
• W3140226293 cites W2038463428 @default.
• W3140226293 cites W2041257508 @default.
• W3140226293 cites W2098126593 @default.
• W3140226293 cites W2108512869 @default.
• W3140226293 cites W2117260150 @default.
• W3140226293 cites W2138666015 @default.
• W3140226293 cites W2142014575 @default.
• W3140226293 cites W2144446929 @default.
• W3140226293 cites W2147618358 @default.
• W3140226293 cites W2149531726 @default.
• W3140226293 cites W2158359278 @default.
• W3140226293 cites W2161339576 @default.
• W3140226293 cites W2169889721 @default.
• W3140226293 cites W2170234851 @default.
• W3140226293 cites W2285732097 @default.
• W3140226293 cites W2523104317 @default.
• W3140226293 cites W2624781625 @default.
• W3140226293 cites W2760233468 @default.
• W3140226293 cites W2789843538 @default.
• W3140226293 cites W2794253170 @default.
• W3140226293 cites W2799524357 @default.
• W3140226293 cites W2908607645 @default.
• W3140226293 cites W2949098200 @default.
• W3140226293 cites W2951291229 @default.
• W3140226293 cites W2982419474 @default.
• W3140226293 cites W2986820495 @default.
• W3140226293 cites W2988267931 @default.
• W3140226293 cites W2988896135 @default.
• W3140226293 cites W2995002605 @default.
• W3140226293 cites W3003735828 @default.
• W3140226293 cites W3012486446 @default.
• W3140226293 cites W3044654061 @default.
• W3140226293 cites W3046184224 @default.
• W3140226293 cites W3048635628 @default.
• W3140226293 doi "https://doi.org/10.1038/s41438-021-00507-0" @default.
• W3140226293 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8012345" @default.
• W3140226293 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/33790238" @default.
• W3140226293 hasPublicationYear "2021" @default.
• W3140226293 type Work @default.
• W3140226293 sameAs 3140226293 @default.
• W3140226293 citedByCount "10" @default.
• W3140226293 countsByYear W31402262932021 @default.
• W3140226293 countsByYear W31402262932022 @default.
• W3140226293 countsByYear W31402262932023 @default.
• W3140226293 crossrefType "journal-article" @default.
• W3140226293 hasAuthorship W3140226293A5011572988 @default.
• W3140226293 hasAuthorship W3140226293A5019699600 @default.
• W3140226293 hasAuthorship W3140226293A5028597798 @default.
• W3140226293 hasAuthorship W3140226293A5037009251 @default.
• W3140226293 hasAuthorship W3140226293A5038658789 @default.
• W3140226293 hasAuthorship W3140226293A5042884422 @default.
• W3140226293 hasAuthorship W3140226293A5045749862 @default.
• W3140226293 hasAuthorship W3140226293A5050759120 @default.
• W3140226293 hasAuthorship W3140226293A5077164569 @default.
• W3140226293 hasAuthorship W3140226293A5083447538 @default.
• W3140226293 hasAuthorship W3140226293A5090299834 @default.
• W3140226293 hasBestOaLocation W31402262931 @default.
• W3140226293 hasConcept C104317684 @default.
• W3140226293 hasConcept C141231307 @default.
• W3140226293 hasConcept C144027150 @default.
• W3140226293 hasConcept C2778369795 @default.
• W3140226293 hasConcept C2779004935 @default.
• W3140226293 hasConcept C2779852692 @default.
• W3140226293 hasConcept C54355233 @default.
• W3140226293 hasConcept C5911399 @default.
• W3140226293 hasConcept C59822182 @default.
• W3140226293 hasConcept C7602840 @default.
• W3140226293 hasConcept C86803240 @default.
• W3140226293 hasConcept C90132467 @default.
• W3140226293 hasConceptScore W3140226293C104317684 @default.
• W3140226293 hasConceptScore W3140226293C141231307 @default.
• W3140226293 hasConceptScore W3140226293C144027150 @default.
• W3140226293 hasConceptScore W3140226293C2778369795 @default.
• W3140226293 hasConceptScore W3140226293C2779004935 @default.
• W3140226293 hasConceptScore W3140226293C2779852692 @default.
• W3140226293 hasConceptScore W3140226293C54355233 @default.

• next