Matches in SemOpenAlex for { <https://semopenalex.org/work/W3163118578> ?p ?o ?g. }
- W3163118578 abstract "The study of microbial communities is hampered by the large fraction of still unknown bacteria. However, many of these species have been isolated, yet lack a validly published name or description. The validation of names for novel bacteria requires that the uniqueness of those taxa is demonstrated and their properties are described. The accepted format for this is the protologue, which can be time-consuming to create. Hence, many research fields in microbiology and biotechnology will greatly benefit from new approaches that reduce the workload and harmonise the generation of protologues.We have developed Protologger, a bioinformatic tool that automatically generates all the necessary readouts for writing a detailed protologue. By producing multiple taxonomic outputs, functional features and ecological analysis using the 16S rRNA gene and genome sequences from a single species, the time needed to gather the information for describing novel taxa is substantially reduced. The usefulness of Protologger was demonstrated by using three published isolate collections to describe 34 novel taxa, encompassing 17 novel species and 17 novel genera, including the automatic generation of ecologically and functionally relevant names. We also highlight the need to utilise multiple taxonomic delineation methods, as while inconsistencies between each method occur, a combined approach provides robust placement. Protologger is open source; all scripts and datasets are available, along with a webserver at www.protologger.de." @default.
- W3163118578 created "2021-05-24" @default.
- W3163118578 creator A5041682758 @default.
- W3163118578 creator A5041987249 @default.
- W3163118578 creator A5074238607 @default.
- W3163118578 creator A5076454359 @default.
- W3163118578 creator A5083660818 @default.
- W3163118578 creator A5090164792 @default.
- W3163118578 date "2021-05-20" @default.
- W3163118578 modified "2023-10-01" @default.
- W3163118578 title "Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria" @default.
- W3163118578 cites W1933623310 @default.
- W3163118578 cites W1939911045 @default.
- W3163118578 cites W1985278587 @default.
- W3163118578 cites W1995510650 @default.
- W3163118578 cites W2001641512 @default.
- W3163118578 cites W2004514057 @default.
- W3163118578 cites W2019541399 @default.
- W3163118578 cites W2023047920 @default.
- W3163118578 cites W2058426473 @default.
- W3163118578 cites W2091922579 @default.
- W3163118578 cites W2096093282 @default.
- W3163118578 cites W2096404721 @default.
- W3163118578 cites W2098386120 @default.
- W3163118578 cites W2099837668 @default.
- W3163118578 cites W2103296919 @default.
- W3163118578 cites W2105329815 @default.
- W3163118578 cites W2112364185 @default.
- W3163118578 cites W2116206245 @default.
- W3163118578 cites W2116913446 @default.
- W3163118578 cites W2122559203 @default.
- W3163118578 cites W2127303481 @default.
- W3163118578 cites W2128777911 @default.
- W3163118578 cites W2129233533 @default.
- W3163118578 cites W2132926880 @default.
- W3163118578 cites W2134375163 @default.
- W3163118578 cites W2136879569 @default.
- W3163118578 cites W2141047744 @default.
- W3163118578 cites W2149017136 @default.
- W3163118578 cites W2159482845 @default.
- W3163118578 cites W2160107164 @default.
- W3163118578 cites W2164337734 @default.
- W3163118578 cites W2187467595 @default.
- W3163118578 cites W2291091413 @default.
- W3163118578 cites W2479246778 @default.
- W3163118578 cites W2513430746 @default.
- W3163118578 cites W2522919408 @default.
- W3163118578 cites W2526966274 @default.
- W3163118578 cites W2533015169 @default.
- W3163118578 cites W2567454503 @default.
- W3163118578 cites W2735611463 @default.
- W3163118578 cites W2745006471 @default.
- W3163118578 cites W2753961085 @default.
- W3163118578 cites W2781750250 @default.
- W3163118578 cites W2781763834 @default.
- W3163118578 cites W2786358949 @default.
- W3163118578 cites W2792729061 @default.
- W3163118578 cites W2801365096 @default.
- W3163118578 cites W2807727258 @default.
- W3163118578 cites W2808042160 @default.
- W3163118578 cites W2863731766 @default.
- W3163118578 cites W2889019390 @default.
- W3163118578 cites W2899643364 @default.
- W3163118578 cites W2901218119 @default.
- W3163118578 cites W2910615673 @default.
- W3163118578 cites W2912883243 @default.
- W3163118578 cites W2913972921 @default.
- W3163118578 cites W2920541859 @default.
- W3163118578 cites W2937916685 @default.
- W3163118578 cites W2946204549 @default.
- W3163118578 cites W2950150251 @default.
- W3163118578 cites W2951254987 @default.
- W3163118578 cites W2971887687 @default.
- W3163118578 cites W2981756030 @default.
- W3163118578 cites W2986925300 @default.
- W3163118578 cites W2997543011 @default.
- W3163118578 cites W2998989016 @default.
- W3163118578 cites W3000477356 @default.
- W3163118578 cites W3003341178 @default.
- W3163118578 cites W3009533854 @default.
- W3163118578 cites W3033733359 @default.
- W3163118578 cites W3034088269 @default.
- W3163118578 cites W3034341880 @default.
- W3163118578 cites W3042305844 @default.
- W3163118578 cites W3092581919 @default.
- W3163118578 cites W3104596207 @default.
- W3163118578 cites W3113375338 @default.
- W3163118578 cites W4233861112 @default.
- W3163118578 cites W4256409604 @default.
- W3163118578 doi "https://doi.org/10.1038/s43705-021-00017-z" @default.
- W3163118578 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/36732617" @default.
- W3163118578 hasPublicationYear "2021" @default.
- W3163118578 type Work @default.
- W3163118578 sameAs 3163118578 @default.
- W3163118578 citedByCount "208" @default.
- W3163118578 countsByYear W31631185782019 @default.
- W3163118578 countsByYear W31631185782021 @default.
- W3163118578 countsByYear W31631185782022 @default.
- W3163118578 countsByYear W31631185782023 @default.
- W3163118578 crossrefType "journal-article" @default.