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- W3164206509 endingPage "2883" @default.
- W3164206509 startingPage "2869" @default.
- W3164206509 abstract "Nanodisc technology is increasingly being applied for structural and biophysical studies of membrane proteins. In this work, we present a general protocol for constructing molecular models of nanodiscs for molecular dynamics simulations. The protocol is written in python and based on geometric equations, making it fast and easy to modify, enabling automation and customization of nanodiscs in silico. The novelty being the ability to construct any membrane scaffold protein (MSP) variant fast and easy given only an input sequence. We validated and tested the protocol by simulating seven different nanodiscs of various sizes and with different membrane scaffold proteins, both circularized and noncircularized. The structural and biophysical properties were analyzed and shown to be in good agreement with previously reported experimental data and simulation studies." @default.
- W3164206509 created "2021-06-07" @default.
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- W3164206509 creator A5089234737 @default.
- W3164206509 date "2021-05-28" @default.
- W3164206509 modified "2023-10-12" @default.
- W3164206509 title "General Protocol for Constructing Molecular Models of Nanodiscs" @default.
- W3164206509 cites W1031578623 @default.
- W3164206509 cites W1145688032 @default.
- W3164206509 cites W1447349601 @default.
- W3164206509 cites W151905713 @default.
- W3164206509 cites W1965141902 @default.
- W3164206509 cites W1965548701 @default.
- W3164206509 cites W1972558208 @default.
- W3164206509 cites W1975769356 @default.
- W3164206509 cites W1984459435 @default.
- W3164206509 cites W1987305898 @default.
- W3164206509 cites W1993151025 @default.
- W3164206509 cites W2003949305 @default.
- W3164206509 cites W2004899462 @default.
- W3164206509 cites W2005574282 @default.
- W3164206509 cites W2008708467 @default.
- W3164206509 cites W2011301426 @default.
- W3164206509 cites W2012929041 @default.
- W3164206509 cites W2019289373 @default.
- W3164206509 cites W2020579993 @default.
- W3164206509 cites W2021520922 @default.
- W3164206509 cites W2024616958 @default.
- W3164206509 cites W2024900979 @default.
- W3164206509 cites W2029195137 @default.
- W3164206509 cites W2029667189 @default.
- W3164206509 cites W2033559770 @default.
- W3164206509 cites W2035266068 @default.
- W3164206509 cites W2043242227 @default.
- W3164206509 cites W2046229956 @default.
- W3164206509 cites W2051232609 @default.
- W3164206509 cites W2051560414 @default.
- W3164206509 cites W2057477511 @default.
- W3164206509 cites W2059845571 @default.
- W3164206509 cites W2060872117 @default.
- W3164206509 cites W2063868052 @default.
- W3164206509 cites W2064388657 @default.
- W3164206509 cites W2067174909 @default.
- W3164206509 cites W2081693079 @default.
- W3164206509 cites W2100736103 @default.
- W3164206509 cites W2109154308 @default.
- W3164206509 cites W2117510530 @default.
- W3164206509 cites W2119267663 @default.
- W3164206509 cites W2123715983 @default.
- W3164206509 cites W2136203025 @default.
- W3164206509 cites W2136716118 @default.
- W3164206509 cites W2143902201 @default.
- W3164206509 cites W2147988069 @default.
- W3164206509 cites W2153914917 @default.
- W3164206509 cites W2163221541 @default.
- W3164206509 cites W2165779834 @default.
- W3164206509 cites W2167738513 @default.
- W3164206509 cites W2170743627 @default.
- W3164206509 cites W2171268876 @default.
- W3164206509 cites W2178132894 @default.
- W3164206509 cites W2206954826 @default.
- W3164206509 cites W2269150528 @default.
- W3164206509 cites W2280153012 @default.
- W3164206509 cites W2294021209 @default.
- W3164206509 cites W2294803096 @default.
- W3164206509 cites W2314292783 @default.
- W3164206509 cites W2327174080 @default.
- W3164206509 cites W2399175532 @default.
- W3164206509 cites W2460255279 @default.
- W3164206509 cites W2510475640 @default.
- W3164206509 cites W2530257779 @default.
- W3164206509 cites W2555054553 @default.
- W3164206509 cites W2560881817 @default.
- W3164206509 cites W2583135152 @default.
- W3164206509 cites W2587450560 @default.
- W3164206509 cites W2626126727 @default.
- W3164206509 cites W2752660625 @default.
- W3164206509 cites W2768114066 @default.
- W3164206509 cites W2771262143 @default.
- W3164206509 cites W2788638979 @default.
- W3164206509 cites W2790536127 @default.
- W3164206509 cites W2802467819 @default.
- W3164206509 cites W2809186947 @default.
- W3164206509 cites W2892331280 @default.
- W3164206509 cites W2892357156 @default.
- W3164206509 cites W2905232362 @default.
- W3164206509 cites W2905876773 @default.
- W3164206509 cites W2913254604 @default.
- W3164206509 cites W2914287521 @default.
- W3164206509 cites W2937315116 @default.
- W3164206509 cites W2951797025 @default.
- W3164206509 cites W2983581724 @default.
- W3164206509 cites W3044541941 @default.