FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3173722013> ?p ?o ?g. }

• W3173722013 endingPage "1211" @default.
• W3173722013 startingPage "1203" @default.
• W3173722013 abstract "Methylation induced DNA base-pairing damage is one of the major causes of cancer. O6-alkylguanine-DNA alkyltransferase (AGT) is considered a demethylation agent of the methylated DNA. Structural investigations with thermodynamic properties of the AGT-DNA complex are still lacking. In this report, we modeled two catalytic states of AGT-DNA interactions and an AGT-DNA covalent complex and explored structural features using molecular dynamics (MD) simulations. We utilized the umbrella sampling method to investigate the changes in the free energy of the interactions in two different AGT-DNA catalytic states, one with methylated GUA in DNA and the other with methylated CYS145 in AGT. These non-covalent complexes represent the pre- and post-repair complexes. Therefore, our study encompasses the process of recognition, complex formation, and separation of the AGT and the damaged (methylated) DNA base. We believe that the use of parameters for the amino acid and nucleotide modifications and for the protein-DNA covalent bond will allow investigations of the DNA repair mechanism as well as the exploration of cancer therapeutics targeting the AGT-DNA complexes at various functional states as well as explorations via stabilization of the complex." @default.
• W3173722013 created "2021-07-05" @default.
• W3173722013 creator A5014141578 @default.
• W3173722013 creator A5030005377 @default.
• W3173722013 creator A5042934564 @default.
• W3173722013 creator A5071186045 @default.
• W3173722013 creator A5079541289 @default.
• W3173722013 creator A5084898918 @default.
• W3173722013 date "2021-06-30" @default.
• W3173722013 modified "2023-10-07" @default.
• W3173722013 title "Structural insights into the repair mechanism of AGT for methyl-induced DNA damage" @default.
• W3173722013 cites W1520889194 @default.
• W3173722013 cites W1971344938 @default.
• W3173722013 cites W1979392838 @default.
• W3173722013 cites W1983013794 @default.
• W3173722013 cites W1988299559 @default.
• W3173722013 cites W1993466974 @default.
• W3173722013 cites W2008466187 @default.
• W3173722013 cites W2010677667 @default.
• W3173722013 cites W2013346353 @default.
• W3173722013 cites W2015047001 @default.
• W3173722013 cites W2015772815 @default.
• W3173722013 cites W2018369441 @default.
• W3173722013 cites W2018938581 @default.
• W3173722013 cites W2022686839 @default.
• W3173722013 cites W2025515800 @default.
• W3173722013 cites W2025605138 @default.
• W3173722013 cites W2029667189 @default.
• W3173722013 cites W2049163206 @default.
• W3173722013 cites W2049351453 @default.
• W3173722013 cites W2055381727 @default.
• W3173722013 cites W2062019364 @default.
• W3173722013 cites W2087484384 @default.
• W3173722013 cites W2088990032 @default.
• W3173722013 cites W2094144162 @default.
• W3173722013 cites W2108931268 @default.
• W3173722013 cites W2112154906 @default.
• W3173722013 cites W2123070547 @default.
• W3173722013 cites W2123936876 @default.
• W3173722013 cites W2127066641 @default.
• W3173722013 cites W2138198662 @default.
• W3173722013 cites W2145200068 @default.
• W3173722013 cites W2150981663 @default.
• W3173722013 cites W2164553847 @default.
• W3173722013 cites W2206954826 @default.
• W3173722013 cites W2483252796 @default.
• W3173722013 cites W2502794595 @default.
• W3173722013 cites W2513815885 @default.
• W3173722013 cites W2555870966 @default.
• W3173722013 cites W2800808951 @default.
• W3173722013 cites W2809046636 @default.
• W3173722013 cites W2852527498 @default.
• W3173722013 cites W2883121131 @default.
• W3173722013 cites W2913810657 @default.
• W3173722013 cites W3005694025 @default.
• W3173722013 cites W3017043401 @default.
• W3173722013 cites W3100565380 @default.
• W3173722013 cites W3120343750 @default.
• W3173722013 cites W3126046906 @default.
• W3173722013 doi "https://doi.org/10.1515/hsz-2021-0198" @default.
• W3173722013 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34192828" @default.
• W3173722013 hasPublicationYear "2021" @default.
• W3173722013 type Work @default.
• W3173722013 sameAs 3173722013 @default.
• W3173722013 citedByCount "4" @default.
• W3173722013 countsByYear W31737220132022 @default.
• W3173722013 crossrefType "journal-article" @default.
• W3173722013 hasAuthorship W3173722013A5014141578 @default.
• W3173722013 hasAuthorship W3173722013A5030005377 @default.
• W3173722013 hasAuthorship W3173722013A5042934564 @default.
• W3173722013 hasAuthorship W3173722013A5071186045 @default.
• W3173722013 hasAuthorship W3173722013A5079541289 @default.
• W3173722013 hasAuthorship W3173722013A5084898918 @default.
• W3173722013 hasBestOaLocation W31737220132 @default.
• W3173722013 hasConcept C104317684 @default.
• W3173722013 hasConcept C134935766 @default.
• W3173722013 hasConcept C150194340 @default.
• W3173722013 hasConcept C16824249 @default.
• W3173722013 hasConcept C178790620 @default.
• W3173722013 hasConcept C180577832 @default.
• W3173722013 hasConcept C185581394 @default.
• W3173722013 hasConcept C185592680 @default.
• W3173722013 hasConcept C190727270 @default.
• W3173722013 hasConcept C512185932 @default.
• W3173722013 hasConcept C552990157 @default.
• W3173722013 hasConcept C55493867 @default.
• W3173722013 hasConceptScore W3173722013C104317684 @default.
• W3173722013 hasConceptScore W3173722013C134935766 @default.
• W3173722013 hasConceptScore W3173722013C150194340 @default.
• W3173722013 hasConceptScore W3173722013C16824249 @default.
• W3173722013 hasConceptScore W3173722013C178790620 @default.
• W3173722013 hasConceptScore W3173722013C180577832 @default.
• W3173722013 hasConceptScore W3173722013C185581394 @default.
• W3173722013 hasConceptScore W3173722013C185592680 @default.
• W3173722013 hasConceptScore W3173722013C190727270 @default.
• W3173722013 hasConceptScore W3173722013C512185932 @default.
• W3173722013 hasConceptScore W3173722013C552990157 @default.
• W3173722013 hasConceptScore W3173722013C55493867 @default.

• next