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- W3186706517 abstract "Peripheral membrane proteins (PMPs) bind temporarily to the surface of biological membranes. They also exist in a soluble form and their tertiary structure is often known. Yet, their membrane-bound form and their interfacial-binding site with membrane lipids remain difficult to observe directly. Their binding and unbinding mechanism, the conformational changes of the PMPs and their influence on the membrane structure are notoriously challenging to study experimentally. Molecular dynamics simulations are particularly useful to fill some knowledge-gaps and provide hypothesis that can be experimentally challenged to further our understanding of PMP-membrane recognition. Because of the time-scales of PMP-membrane binding events and the computational costs associated with molecular dynamics simulations, membrane models at different levels of resolution are used and often combined in multiscale simulation strategies. We here review membrane models belonging to three classes: atomistic, coarse-grained and implicit. Differences between models are rooted in the underlying theories and the reference data they are parameterized against. The choice of membrane model should therefore not only be guided by its computational efficiency. The range of applications of each model is discussed and illustrated using examples from the literature." @default.
- W3186706517 created "2021-08-02" @default.
- W3186706517 creator A5003335206 @default.
- W3186706517 creator A5010418611 @default.
- W3186706517 creator A5042974982 @default.
- W3186706517 creator A5090274388 @default.
- W3186706517 date "2021-01-01" @default.
- W3186706517 modified "2023-10-12" @default.
- W3186706517 title "Membrane models for molecular simulations of peripheral membrane proteins" @default.
- W3186706517 cites W1031578623 @default.
- W3186706517 cites W1224729583 @default.
- W3186706517 cites W1560318808 @default.
- W3186706517 cites W1607501108 @default.
- W3186706517 cites W1878733133 @default.
- W3186706517 cites W1904921449 @default.
- W3186706517 cites W1923303716 @default.
- W3186706517 cites W1948844441 @default.
- W3186706517 cites W1964694986 @default.
- W3186706517 cites W1965141902 @default.
- W3186706517 cites W1977486075 @default.
- W3186706517 cites W1978730075 @default.
- W3186706517 cites W1981303221 @default.
- W3186706517 cites W1981559490 @default.
- W3186706517 cites W1982792659 @default.
- W3186706517 cites W1984909504 @default.
- W3186706517 cites W1990972809 @default.
- W3186706517 cites W1991335271 @default.
- W3186706517 cites W1992538713 @default.
- W3186706517 cites W1992899488 @default.
- W3186706517 cites W1993177346 @default.
- W3186706517 cites W1993865166 @default.
- W3186706517 cites W1995816895 @default.
- W3186706517 cites W1996743545 @default.
- W3186706517 cites W1997241998 @default.
- W3186706517 cites W1999133834 @default.
- W3186706517 cites W1999458597 @default.
- W3186706517 cites W1999493392 @default.
- W3186706517 cites W1999945761 @default.
- W3186706517 cites W2002659345 @default.
- W3186706517 cites W2004344365 @default.
- W3186706517 cites W2004738999 @default.
- W3186706517 cites W2004802646 @default.
- W3186706517 cites W2005162548 @default.
- W3186706517 cites W2007313234 @default.
- W3186706517 cites W2017998270 @default.
- W3186706517 cites W2021966802 @default.
- W3186706517 cites W2023256284 @default.
- W3186706517 cites W2023977480 @default.
- W3186706517 cites W2026551464 @default.
- W3186706517 cites W2027408247 @default.
- W3186706517 cites W2028263411 @default.
- W3186706517 cites W2028470105 @default.
- W3186706517 cites W2028702957 @default.
- W3186706517 cites W2029582401 @default.
- W3186706517 cites W2029667189 @default.
- W3186706517 cites W2030787892 @default.
- W3186706517 cites W2030866163 @default.
- W3186706517 cites W2031232800 @default.
- W3186706517 cites W2038530231 @default.
- W3186706517 cites W2038995335 @default.
- W3186706517 cites W2039541189 @default.
- W3186706517 cites W2041189078 @default.
- W3186706517 cites W2043312574 @default.
- W3186706517 cites W2044307316 @default.
- W3186706517 cites W2044487118 @default.
- W3186706517 cites W2045600603 @default.
- W3186706517 cites W2047560265 @default.
- W3186706517 cites W2047730466 @default.
- W3186706517 cites W2047870719 @default.
- W3186706517 cites W2048313563 @default.
- W3186706517 cites W2048496209 @default.
- W3186706517 cites W2049286183 @default.
- W3186706517 cites W2050163942 @default.
- W3186706517 cites W2050333027 @default.
- W3186706517 cites W2051381895 @default.
- W3186706517 cites W2051864856 @default.
- W3186706517 cites W2055833358 @default.
- W3186706517 cites W2057664120 @default.
- W3186706517 cites W2060055736 @default.
- W3186706517 cites W2060698386 @default.
- W3186706517 cites W2060872117 @default.
- W3186706517 cites W2060989256 @default.
- W3186706517 cites W2061363002 @default.
- W3186706517 cites W2063610611 @default.
- W3186706517 cites W2065101872 @default.
- W3186706517 cites W2065963893 @default.
- W3186706517 cites W2066414494 @default.
- W3186706517 cites W2066775733 @default.
- W3186706517 cites W2068659658 @default.
- W3186706517 cites W2069199990 @default.
- W3186706517 cites W2069612854 @default.
- W3186706517 cites W2073765675 @default.
- W3186706517 cites W2074400765 @default.
- W3186706517 cites W2079078721 @default.
- W3186706517 cites W2080165003 @default.
- W3186706517 cites W2081260116 @default.
- W3186706517 cites W2081431207 @default.
- W3186706517 cites W2082272518 @default.
- W3186706517 cites W2085709924 @default.
- W3186706517 cites W2085989411 @default.