Matches in SemOpenAlex for { <https://semopenalex.org/work/W3200098346> ?p ?o ?g. }
- W3200098346 abstract "Aegilops tauschii is the donor of the D subgenome of hexaploid wheat and an important genetic resource. The reference-quality genome sequence Aet v4.0 for Ae. tauschii acc. AL8/78 was therefore an important milestone for wheat biology and breeding. Further advances in sequencing acc. AL8/78 and release of the Aet v5.0 sequence assembly are reported here. Two new optical maps were constructed and used in the revision of pseudomolecules. Gaps were closed with Pacific Biosciences long-read contigs, decreasing the gap number by 38,899. Transposable elements and protein-coding genes were reannotated. The number of annotated high-confidence genes was reduced from 39,635 in Aet v4.0 to 32,885 in Aet v5.0. A total of 2245 biologically important genes, including those affecting plant phenology, grain quality, and tolerance of abiotic stresses in wheat, was manually annotated and disease-resistance genes were annotated by a dedicated pipeline. Disease-resistance genes encoding nucleotide-binding site domains, receptor-like protein kinases, and receptor-like proteins were preferentially located in distal chromosome regions, whereas those encoding transmembrane coiled-coil proteins were dispersed more evenly along the chromosomes. Discovery, annotation, and expression analyses of microRNA (miRNA) precursors, mature miRNAs, and phasiRNAs are reported, including miRNA target genes. Other small RNAs, such as hc-siRNAs and tRFs, were characterized. These advances enhance the utility of the Ae. tauschii genome sequence for wheat genetics, biotechnology, and breeding." @default.
- W3200098346 created "2021-09-27" @default.
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- W3200098346 date "2021-09-13" @default.
- W3200098346 modified "2023-10-06" @default.
- W3200098346 title "<i>Aegilops tauschii</i> genome assembly Aet v5.0 features greater sequence contiguity and improved annotation" @default.
- W3200098346 cites W1487554690 @default.
- W3200098346 cites W1518701384 @default.
- W3200098346 cites W1965435190 @default.
- W3200098346 cites W1972668757 @default.
- W3200098346 cites W1973741574 @default.
- W3200098346 cites W1980340421 @default.
- W3200098346 cites W1987423713 @default.
- W3200098346 cites W1989581558 @default.
- W3200098346 cites W1990636376 @default.
- W3200098346 cites W1990813498 @default.
- W3200098346 cites W2004016211 @default.
- W3200098346 cites W2005770138 @default.
- W3200098346 cites W2007870946 @default.
- W3200098346 cites W2011657487 @default.
- W3200098346 cites W2012012446 @default.
- W3200098346 cites W2013063066 @default.
- W3200098346 cites W2013892862 @default.
- W3200098346 cites W2014901732 @default.
- W3200098346 cites W2022366078 @default.
- W3200098346 cites W2047065864 @default.
- W3200098346 cites W2054254276 @default.
- W3200098346 cites W2055043387 @default.
- W3200098346 cites W2062477849 @default.
- W3200098346 cites W2065914941 @default.
- W3200098346 cites W2081130457 @default.
- W3200098346 cites W2082330286 @default.
- W3200098346 cites W2102005894 @default.
- W3200098346 cites W2102278945 @default.
- W3200098346 cites W2104005232 @default.
- W3200098346 cites W2108624927 @default.
- W3200098346 cites W2109525082 @default.
- W3200098346 cites W2111720595 @default.
- W3200098346 cites W2112814753 @default.
- W3200098346 cites W2122135986 @default.
- W3200098346 cites W2128863653 @default.
- W3200098346 cites W2129590876 @default.
- W3200098346 cites W2131271579 @default.
- W3200098346 cites W2134783286 @default.
- W3200098346 cites W2143172257 @default.
- W3200098346 cites W2145792266 @default.
- W3200098346 cites W2155628349 @default.
- W3200098346 cites W2157117058 @default.
- W3200098346 cites W2169029772 @default.
- W3200098346 cites W2170551349 @default.
- W3200098346 cites W2171808845 @default.
- W3200098346 cites W2322314122 @default.
- W3200098346 cites W2336081929 @default.
- W3200098346 cites W2349198492 @default.
- W3200098346 cites W2405688533 @default.
- W3200098346 cites W2472783066 @default.
- W3200098346 cites W2548365387 @default.
- W3200098346 cites W2580040938 @default.
- W3200098346 cites W2768703572 @default.
- W3200098346 cites W2770565810 @default.
- W3200098346 cites W2772231999 @default.
- W3200098346 cites W2784206509 @default.
- W3200098346 cites W2800206218 @default.
- W3200098346 cites W2802158184 @default.
- W3200098346 cites W2807562835 @default.
- W3200098346 cites W2889502001 @default.
- W3200098346 cites W2895597923 @default.
- W3200098346 cites W2905579620 @default.
- W3200098346 cites W2949470979 @default.
- W3200098346 cites W2949536040 @default.
- W3200098346 cites W2950847039 @default.
- W3200098346 cites W3043266360 @default.
- W3200098346 cites W3056583907 @default.
- W3200098346 cites W3134848807 @default.
- W3200098346 cites W3152539674 @default.