Matches in SemOpenAlex for { <https://semopenalex.org/work/W3200468480> ?p ?o ?g. }
- W3200468480 endingPage "995" @default.
- W3200468480 startingPage "973" @default.
- W3200468480 abstract "Active heterotrophic metabolism is a critical metabolic role performed by sponge-associated microorganisms, but little is known about their capacity to metabolize marine polysaccharides (MPs). Here, we investigated the genome of the sponge-derived Pseudoalteromonas sp. strain PA2MD11 focusing on its macroalgal carbohydrate-degrading potential. Carbohydrate-active enzymes (CAZymes) for the depolymerization of agar and alginate were found in PA2MD11's genome, including glycoside hydrolases (GHs) and polysaccharide lyases (PLs) belonging to families GH16, GH50 and GH117, and PL6 and PL17, respectively. A gene potentially encoding a sulfatase was also identified, which may play a role in the strain's ability to consume carrageenans. The complete metabolism of agar and alginate by PA2MD11 could also be predicted and was consistent with the results obtained in physiological assays. The polysaccharide utilization locus (PUL) potentially involved in the metabolism of agarose contained mobile genetic elements from other marine Gammaproteobacteria and its unusual larger size might be due to gene duplication events. Homology modelling and structural protein analyses of the agarases, alginate lyases and sulfatase depicted clear conservation of catalytic machinery and protein folding together with suitable industrially-relevant features. Pseudoalteromonas sp. PA2MD11 is therefore a source of potential MP-degrading biocatalysts for biorefinery applications and in the preparation of pharmacologically-active oligosaccharides." @default.
- W3200468480 created "2021-09-27" @default.
- W3200468480 creator A5003887698 @default.
- W3200468480 creator A5006187165 @default.
- W3200468480 creator A5007044089 @default.
- W3200468480 creator A5016681003 @default.
- W3200468480 creator A5016707021 @default.
- W3200468480 creator A5067271747 @default.
- W3200468480 creator A5067650656 @default.
- W3200468480 date "2021-11-01" @default.
- W3200468480 modified "2023-10-18" @default.
- W3200468480 title "Genomic and in silico protein structural analyses provide insights into marine polysaccharide-degrading enzymes in the sponge-derived Pseudoalteromonas sp. PA2MD11" @default.
- W3200468480 cites W1033569027 @default.
- W3200468480 cites W1545520127 @default.
- W3200468480 cites W1658711761 @default.
- W3200468480 cites W1715922347 @default.
- W3200468480 cites W1772285605 @default.
- W3200468480 cites W1970534072 @default.
- W3200468480 cites W1983485200 @default.
- W3200468480 cites W1984225141 @default.
- W3200468480 cites W1985164519 @default.
- W3200468480 cites W1990208235 @default.
- W3200468480 cites W1992192767 @default.
- W3200468480 cites W2015213243 @default.
- W3200468480 cites W2018544633 @default.
- W3200468480 cites W2019176012 @default.
- W3200468480 cites W2022767095 @default.
- W3200468480 cites W2034830710 @default.
- W3200468480 cites W2048440639 @default.
- W3200468480 cites W2049632519 @default.
- W3200468480 cites W2050008636 @default.
- W3200468480 cites W2051742215 @default.
- W3200468480 cites W2055043387 @default.
- W3200468480 cites W2062031328 @default.
- W3200468480 cites W2071486470 @default.
- W3200468480 cites W2072160775 @default.
- W3200468480 cites W2075285231 @default.
- W3200468480 cites W2080915318 @default.
- W3200468480 cites W2091640255 @default.
- W3200468480 cites W2091922579 @default.
- W3200468480 cites W2094458603 @default.
- W3200468480 cites W2094810730 @default.
- W3200468480 cites W2096093282 @default.
- W3200468480 cites W2101291993 @default.
- W3200468480 cites W2102993309 @default.
- W3200468480 cites W2106177507 @default.
- W3200468480 cites W2107772251 @default.
- W3200468480 cites W2108202717 @default.
- W3200468480 cites W2108615599 @default.
- W3200468480 cites W2112364185 @default.
- W3200468480 cites W2116206245 @default.
- W3200468480 cites W2117484859 @default.
- W3200468480 cites W2120902911 @default.
- W3200468480 cites W2121055398 @default.
- W3200468480 cites W2122559203 @default.
- W3200468480 cites W2127096898 @default.
- W3200468480 cites W2128285159 @default.
- W3200468480 cites W2132629607 @default.
- W3200468480 cites W2133213694 @default.
- W3200468480 cites W2133865221 @default.
- W3200468480 cites W2135640245 @default.
- W3200468480 cites W2137450588 @default.
- W3200468480 cites W2137885656 @default.
- W3200468480 cites W2145034001 @default.
- W3200468480 cites W2150491437 @default.
- W3200468480 cites W2152770371 @default.
- W3200468480 cites W2154401636 @default.
- W3200468480 cites W2156273926 @default.
- W3200468480 cites W2162792752 @default.
- W3200468480 cites W2168974130 @default.
- W3200468480 cites W2178043251 @default.
- W3200468480 cites W2213856969 @default.
- W3200468480 cites W2322228166 @default.
- W3200468480 cites W2336400828 @default.
- W3200468480 cites W2345623600 @default.
- W3200468480 cites W2345791363 @default.
- W3200468480 cites W2346531815 @default.
- W3200468480 cites W2471037109 @default.
- W3200468480 cites W2474014164 @default.
- W3200468480 cites W2481872816 @default.
- W3200468480 cites W2516639769 @default.
- W3200468480 cites W2521957974 @default.
- W3200468480 cites W2530932995 @default.
- W3200468480 cites W2532767550 @default.
- W3200468480 cites W2544180383 @default.
- W3200468480 cites W2556108413 @default.
- W3200468480 cites W2559191318 @default.
- W3200468480 cites W2560840282 @default.
- W3200468480 cites W2579986502 @default.
- W3200468480 cites W2581697163 @default.
- W3200468480 cites W2585824726 @default.
- W3200468480 cites W2593123545 @default.
- W3200468480 cites W2620185010 @default.
- W3200468480 cites W2626022009 @default.
- W3200468480 cites W2648949596 @default.
- W3200468480 cites W2724301682 @default.
- W3200468480 cites W2734840259 @default.
- W3200468480 cites W2747589519 @default.