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• W3200547404 abstract "MicroRNAs (miRNAs) and their target genes play vital roles in crops. However, the genetic variations in miRNA-targeted sites that affect miRNA cleavage efficiency and their correlations with agronomic traits in crops remain unexplored. On the basis of a genome-wide DNA re-sequencing of 210 elite rapeseed ( Brassica napus ) accessions, we identified the single nucleotide polymorphisms (SNPs) and insertions/deletions (INDELs) in miRNA-targeted sites complementary to miRNAs. Variant calling revealed 7.14 million SNPs and 2.89 million INDELs throughout the genomes of 210 rapeseed accessions. Furthermore, we detected 330 SNPs and 79 INDELs in 357 miRNA target sites, of which 33.50% were rare variants. We also analyzed the correlation between the genetic variations in miRNA target sites and 12 rapeseed agronomic traits. Eleven SNPs in miRNA target sites were significantly correlated with phenotypes in three consecutive years. More specifically, three correlated SNPs within the miRNA-binding regions of BnSPL9-3 , BnSPL13-2 , and BnCUC1-2 were in the loci associated with the branch angle, seed weight, and silique number, respectively; expression profiling suggested that the variation at these 3 miRNA target sites significantly affected the expression level of the corresponding target genes. Taken together, the results of this study provide researchers and breeders with a global view of the genetic variations in miRNA-targeted sites in rapeseed and reveal the potential effects of these genetic variations on elite agronomic traits." @default.
• W3200547404 created "2021-09-27" @default.
• W3200547404 creator A5008562186 @default.
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• W3200547404 date "2021-09-14" @default.
• W3200547404 modified "2023-09-28" @default.
• W3200547404 title "Global Analysis of the Genetic Variations in miRNA-Targeted Sites and Their Correlations With Agronomic Traits in Rapeseed" @default.
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• W3200547404 cites W1975823101 @default.
• W3200547404 cites W1977851636 @default.
• W3200547404 cites W1988861169 @default.
• W3200547404 cites W2011518477 @default.
• W3200547404 cites W2011820514 @default.
• W3200547404 cites W2012591945 @default.
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• W3200547404 cites W2030166934 @default.
• W3200547404 cites W2030989926 @default.
• W3200547404 cites W2035192299 @default.
• W3200547404 cites W2042827641 @default.
• W3200547404 cites W2048498623 @default.
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• W3200547404 cites W2156407733 @default.
• W3200547404 cites W2157039533 @default.
• W3200547404 cites W2161890558 @default.
• W3200547404 cites W2165117712 @default.
• W3200547404 cites W2170161720 @default.
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• W3200547404 doi "https://doi.org/10.3389/fgene.2021.741858" @default.
• W3200547404 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8476912" @default.
• W3200547404 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34594365" @default.
• W3200547404 hasPublicationYear "2021" @default.
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