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- W3201310012 abstract "Transposable elements (TEs) have long been known to be major contributors to plant evolution, adaptation and crop domestication. Stress-induced TE mobilization is of particular interest because it may result in novel gene regulatory pathways responding to stresses and thereby contribute to stress adaptation. Here, we investigated the genomic impacts of stress induced TE mobilization in wild type Arabidopsis plants. We find that the heat-stress responsive ONSEN TE displays an insertion site preference that is associated with specific chromatin states, especially those rich in H2A.Z histone variant and H3K27me3 histone mark. In order to better understand how novel ONSEN insertions affect the plant's response to heat stress, we carried out an in-depth transcriptomic analysis. We find that in addition to simple gene knockouts, ONSEN can produce a plethora of gene expression changes such as: constitutive activation of gene expression, alternative splicing, acquisition of heat-responsiveness, exonisation and genesis of novel non-coding and antisense RNAs. This report shows how the mobilization of a single TE-family can lead to a rapid rise of its copy number increasing the host's genome size and contribute to a broad range of transcriptomic novelty on which natural selection can then act." @default.
- W3201310012 created "2021-09-27" @default.
- W3201310012 creator A5026726872 @default.
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- W3201310012 creator A5055654386 @default.
- W3201310012 creator A5063098798 @default.
- W3201310012 creator A5083287094 @default.
- W3201310012 date "2021-09-22" @default.
- W3201310012 modified "2023-10-14" @default.
- W3201310012 title "Genomic impact of stress-induced transposable element mobility in Arabidopsis" @default.
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- W3201310012 doi "https://doi.org/10.1093/nar/gkab828" @default.
- W3201310012 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8501995" @default.
- W3201310012 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34551439" @default.
- W3201310012 hasPublicationYear "2021" @default.
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