FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3204253451> ?p ?o ?g. }

• W3204253451 endingPage "e0258193" @default.
• W3204253451 startingPage "e0258193" @default.
• W3204253451 abstract "Copy number variation is an important source of genetic variation, yet data are often lacking due to technical limitations for detection given the current genome assemblies. Our goal is to demonstrate the extent to which an array-based platform (aCGH) can identify genomic loci that are collapsed in genome assemblies that were built with short-read technology. Taking advantage of two cichlid species for which genome assemblies based on Illumina and PacBio are available, we show that inter-species aCGH log 2 hybridization ratios correlate more strongly with inferred copy number differences based on PacBio-built genome assemblies than based on Illumina-built genome assemblies. With regard to inter-species copy number differences of specific genes identified by each platform, the set identified by aCGH intersects to a greater extent with the set identified by PacBio than with the set identified by Illumina. Gene function, according to Gene Ontology analysis, did not substantially differ among platforms, and platforms converged on functions associated with adaptive phenotypes. The results of the current study further demonstrate that aCGH is an effective platform for identifying copy number variable sequences, particularly those collapsed in short read genome assemblies." @default.
• W3204253451 created "2021-10-11" @default.
• W3204253451 creator A5009145753 @default.
• W3204253451 creator A5019021265 @default.
• W3204253451 creator A5034607606 @default.
• W3204253451 date "2021-10-07" @default.
• W3204253451 modified "2023-09-27" @default.
• W3204253451 title "Correspondence of aCGH and long-read genome assembly for detection of copy number differences: A proof-of-concept with cichlid genomes" @default.
• W3204253451 cites W1974116356 @default.
• W3204253451 cites W1976859294 @default.
• W3204253451 cites W1986179961 @default.
• W3204253451 cites W1989915239 @default.
• W3204253451 cites W1998330439 @default.
• W3204253451 cites W2038382815 @default.
• W3204253451 cites W2058815816 @default.
• W3204253451 cites W2066491171 @default.
• W3204253451 cites W2072412552 @default.
• W3204253451 cites W2072895035 @default.
• W3204253451 cites W2087464200 @default.
• W3204253451 cites W2095266606 @default.
• W3204253451 cites W2098523609 @default.
• W3204253451 cites W2108532031 @default.
• W3204253451 cites W2116126626 @default.
• W3204253451 cites W2116944195 @default.
• W3204253451 cites W2118981217 @default.
• W3204253451 cites W2124866579 @default.
• W3204253451 cites W2125937218 @default.
• W3204253451 cites W2126116549 @default.
• W3204253451 cites W2128110587 @default.
• W3204253451 cites W2128395009 @default.
• W3204253451 cites W2129589249 @default.
• W3204253451 cites W2130021473 @default.
• W3204253451 cites W2145406188 @default.
• W3204253451 cites W2146512475 @default.
• W3204253451 cites W2146512944 @default.
• W3204253451 cites W2159405964 @default.
• W3204253451 cites W2164346385 @default.
• W3204253451 cites W2165546936 @default.
• W3204253451 cites W2165933771 @default.
• W3204253451 cites W2167142288 @default.
• W3204253451 cites W2167722550 @default.
• W3204253451 cites W2464063823 @default.
• W3204253451 cites W2470873636 @default.
• W3204253451 cites W2886367945 @default.
• W3204253451 cites W2894129476 @default.
• W3204253451 cites W2947684550 @default.
• W3204253451 cites W2950830304 @default.
• W3204253451 cites W2953039206 @default.
• W3204253451 cites W2971292874 @default.
• W3204253451 cites W3023272815 @default.
• W3204253451 doi "https://doi.org/10.1371/journal.pone.0258193" @default.
• W3204253451 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8496808" @default.
• W3204253451 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34618847" @default.
• W3204253451 hasPublicationYear "2021" @default.
• W3204253451 type Work @default.
• W3204253451 sameAs 3204253451 @default.
• W3204253451 citedByCount "0" @default.
• W3204253451 crossrefType "journal-article" @default.
• W3204253451 hasAuthorship W3204253451A5009145753 @default.
• W3204253451 hasAuthorship W3204253451A5019021265 @default.
• W3204253451 hasAuthorship W3204253451A5034607606 @default.
• W3204253451 hasBestOaLocation W32042534511 @default.
• W3204253451 hasConcept C104317684 @default.
• W3204253451 hasConcept C120821319 @default.
• W3204253451 hasConcept C124942203 @default.
• W3204253451 hasConcept C141231307 @default.
• W3204253451 hasConcept C151020129 @default.
• W3204253451 hasConcept C54355233 @default.
• W3204253451 hasConcept C70721500 @default.
• W3204253451 hasConcept C78458016 @default.
• W3204253451 hasConcept C86803240 @default.
• W3204253451 hasConceptScore W3204253451C104317684 @default.
• W3204253451 hasConceptScore W3204253451C120821319 @default.
• W3204253451 hasConceptScore W3204253451C124942203 @default.
• W3204253451 hasConceptScore W3204253451C141231307 @default.
• W3204253451 hasConceptScore W3204253451C151020129 @default.
• W3204253451 hasConceptScore W3204253451C54355233 @default.
• W3204253451 hasConceptScore W3204253451C70721500 @default.
• W3204253451 hasConceptScore W3204253451C78458016 @default.
• W3204253451 hasConceptScore W3204253451C86803240 @default.
• W3204253451 hasFunder F4320337354 @default.
• W3204253451 hasFunder F4320337400 @default.
• W3204253451 hasIssue "10" @default.
• W3204253451 hasLocation W32042534511 @default.
• W3204253451 hasLocation W32042534512 @default.
• W3204253451 hasLocation W32042534513 @default.
• W3204253451 hasLocation W32042534514 @default.
• W3204253451 hasOpenAccess W3204253451 @default.
• W3204253451 hasPrimaryLocation W32042534511 @default.
• W3204253451 hasRelatedWork W2001238177 @default.
• W3204253451 hasRelatedWork W2003922337 @default.
• W3204253451 hasRelatedWork W2039985673 @default.
• W3204253451 hasRelatedWork W2090795400 @default.
• W3204253451 hasRelatedWork W2115134931 @default.
• W3204253451 hasRelatedWork W2115701471 @default.
• W3204253451 hasRelatedWork W2154009110 @default.
• W3204253451 hasRelatedWork W2155557383 @default.
• W3204253451 hasRelatedWork W2160911017 @default.

• next