FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3206361007> ?p ?o ?g. }

• W3206361007 abstract "Glycan-related genes play a fundamental role in various processes for energy acquisition and homeostasis maintenance while adapting to the environment in which the organism exists; however, their role in the microbiome in the environment is unclear.Sequence alignment was performed between known glycan-related genes and complete genomes of microorganisms, and optimal parameters for identifying glycan-related genes were determined based on the alignments. Using the constructed scheme (> 90% of identity and > 25 aa of alignment length), glycan-related genes in various environments were identified from 198 different metagenome data.As a result, we identified 86.73 million glycan-related genes from the metagenome data. Among the 12 environments classified in this study, the percentage of glycan-related genes was high in the human-associated environment, suggesting that these environments utilize glycan metabolism better than other environments. On the other hand, the relative abundances of both glycoside hydrolases and glycosyltransferases surprisingly had a coverage of over 80% in all the environments. These glycoside hydrolases and glycosyltransferases were classified into two groups of (1) general enzyme families identified in various environments and (2) specific enzymes found only in certain environments. The general enzyme families were mostly from genes involved in monosaccharide metabolism, and most of the specific enzymes were polysaccharide degrading enzymes.These findings suggest that environmental microorganisms could change the composition of their glycan-related genes to adapt the processes involved in acquiring energy from glycans in their environments. Our functional glyco-metagenomics approach has made it possible to clarify the relationship between the environment and genes from the perspective of carbohydrates, and the existence of glycan-related genes that exist specifically in the environment." @default.
• W3206361007 created "2021-10-25" @default.
• W3206361007 creator A5032717386 @default.
• W3206361007 creator A5042790078 @default.
• W3206361007 creator A5062655330 @default.
• W3206361007 creator A5086046921 @default.
• W3206361007 date "2021-10-18" @default.
• W3206361007 modified "2023-10-17" @default.
• W3206361007 title "Functional glyco-metagenomics elucidates the role of glycan-related genes in environments" @default.
• W3206361007 cites W135593221 @default.
• W3206361007 cites W1577826155 @default.
• W3206361007 cites W1772341111 @default.
• W3206361007 cites W1830745998 @default.
• W3206361007 cites W1975690483 @default.
• W3206361007 cites W1983922226 @default.
• W3206361007 cites W1985468934 @default.
• W3206361007 cites W1991497480 @default.
• W3206361007 cites W1999558053 @default.
• W3206361007 cites W2011490067 @default.
• W3206361007 cites W2020193680 @default.
• W3206361007 cites W2060183982 @default.
• W3206361007 cites W2078279870 @default.
• W3206361007 cites W2094470156 @default.
• W3206361007 cites W2097707848 @default.
• W3206361007 cites W2106399600 @default.
• W3206361007 cites W2108929776 @default.
• W3206361007 cites W2111847118 @default.
• W3206361007 cites W2112874908 @default.
• W3206361007 cites W2113601822 @default.
• W3206361007 cites W2113964973 @default.
• W3206361007 cites W2114089110 @default.
• W3206361007 cites W2122559203 @default.
• W3206361007 cites W2127175247 @default.
• W3206361007 cites W2163642241 @default.
• W3206361007 cites W2346538456 @default.
• W3206361007 cites W2611744819 @default.
• W3206361007 cites W2790860165 @default.
• W3206361007 cites W2803787045 @default.
• W3206361007 cites W2808794730 @default.
• W3206361007 cites W2907581332 @default.
• W3206361007 cites W2909166874 @default.
• W3206361007 cites W2922258649 @default.
• W3206361007 cites W2966589940 @default.
• W3206361007 cites W2967074377 @default.
• W3206361007 cites W2969718750 @default.
• W3206361007 cites W2970548640 @default.
• W3206361007 cites W2983853009 @default.
• W3206361007 cites W2984263864 @default.
• W3206361007 cites W2999232642 @default.
• W3206361007 cites W3006574710 @default.
• W3206361007 cites W3009973186 @default.
• W3206361007 cites W3096828292 @default.
• W3206361007 cites W4247329707 @default.
• W3206361007 doi "https://doi.org/10.1186/s12859-021-04425-9" @default.
• W3206361007 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8522060" @default.
• W3206361007 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34663219" @default.
• W3206361007 hasPublicationYear "2021" @default.
• W3206361007 type Work @default.
• W3206361007 sameAs 3206361007 @default.
• W3206361007 citedByCount "1" @default.
• W3206361007 countsByYear W32063610072023 @default.
• W3206361007 crossrefType "journal-article" @default.
• W3206361007 hasAuthorship W3206361007A5032717386 @default.
• W3206361007 hasAuthorship W3206361007A5042790078 @default.
• W3206361007 hasAuthorship W3206361007A5062655330 @default.
• W3206361007 hasAuthorship W3206361007A5086046921 @default.
• W3206361007 hasBestOaLocation W32063610071 @default.
• W3206361007 hasConcept C104317684 @default.
• W3206361007 hasConcept C108625454 @default.
• W3206361007 hasConcept C141231307 @default.
• W3206361007 hasConcept C143121216 @default.
• W3206361007 hasConcept C150194340 @default.
• W3206361007 hasConcept C15151743 @default.
• W3206361007 hasConcept C161019410 @default.
• W3206361007 hasConcept C196032511 @default.
• W3206361007 hasConcept C206212055 @default.
• W3206361007 hasConcept C54355233 @default.
• W3206361007 hasConcept C70721500 @default.
• W3206361007 hasConcept C86803240 @default.
• W3206361007 hasConcept C95371953 @default.
• W3206361007 hasConceptScore W3206361007C104317684 @default.
• W3206361007 hasConceptScore W3206361007C108625454 @default.
• W3206361007 hasConceptScore W3206361007C141231307 @default.
• W3206361007 hasConceptScore W3206361007C143121216 @default.
• W3206361007 hasConceptScore W3206361007C150194340 @default.
• W3206361007 hasConceptScore W3206361007C15151743 @default.
• W3206361007 hasConceptScore W3206361007C161019410 @default.
• W3206361007 hasConceptScore W3206361007C196032511 @default.
• W3206361007 hasConceptScore W3206361007C206212055 @default.
• W3206361007 hasConceptScore W3206361007C54355233 @default.
• W3206361007 hasConceptScore W3206361007C70721500 @default.
• W3206361007 hasConceptScore W3206361007C86803240 @default.
• W3206361007 hasConceptScore W3206361007C95371953 @default.
• W3206361007 hasFunder F4320334789 @default.
• W3206361007 hasIssue "1" @default.
• W3206361007 hasLocation W32063610071 @default.
• W3206361007 hasLocation W32063610072 @default.
• W3206361007 hasLocation W32063610073 @default.
• W3206361007 hasLocation W32063610074 @default.
• W3206361007 hasOpenAccess W3206361007 @default.

• next