FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3206783273> ?p ?o ?g. }

• W3206783273 endingPage "938" @default.
• W3206783273 startingPage "938" @default.
• W3206783273 abstract "Bactrocera dorsalis (Hendel), as one of the most notorious and destructive invasive agricultural pests in the world, causes damage to over 250 different types of fruits and vegetables throughout tropical and subtropical areas. PacBio single-molecule real-time (SMRT) sequencing was used to generate the full-length transcriptome data of B. dorsalis. A total of 40,319,890 subreads (76.6 Gb, clean reads) were generated, including 535,241 circular consensus sequences (CCSs) and 386,916 full-length non-concatemer reads (FLNCs). Transcript cluster analysis of the FLNC reads revealed 22,780 high-quality reads (HQs). In total, 12,274 transcripts were functionally annotated based on four different databases. A total of 1978 SSR loci were distributed throughout 1714 HQ transcripts, of which 1926 were complete SSRs and 52 were complex SSRs. Among the total SSR loci, 2-3 nucleotide repeats were dominant, occupying 83.62%, of which di- and tri- nucleotide repeats were 39.38% and 44.24%, respectively. We detected 105 repeat motifs, of which AT/AT (50.19%), AC/GT (39.15%), CAA/TTG (32.46%), and ACA/TGT (10.86%) were the most common in di- and tri-nucleotide repeats. The repeat SSR motifs were 12-190 bp in length, and 1638 (88.02%) were shorter than 20 bp. According to the randomly selected microsatellite sequence, 80 pairs of primers were designed, and 174 individuals were randomly amplified by PCR using primers. The number of primers that had amplification products with clear bands and showed good polymorphism came to 41, indicating that this was a feasible way to explore SSR markers from the transcriptomic data of B. dorsalis. These results lay a foundation for developing highly polymorphic microsatellites for researching the functional genomics, population genetic structure, and genetic diversity of B. dorsalis." @default.
• W3206783273 created "2021-10-25" @default.
• W3206783273 creator A5021069675 @default.
• W3206783273 creator A5032482127 @default.
• W3206783273 creator A5040449741 @default.
• W3206783273 creator A5044355775 @default.
• W3206783273 creator A5066898909 @default.
• W3206783273 creator A5072727640 @default.
• W3206783273 date "2021-10-14" @default.
• W3206783273 modified "2023-10-14" @default.
• W3206783273 title "Full-Length SMRT Transcriptome Sequencing and SSR Analysis of Bactrocera dorsalis (Hendel)" @default.
• W3206783273 cites W1965403470 @default.
• W3206783273 cites W1998660217 @default.
• W3206783273 cites W2022868443 @default.
• W3206783273 cites W2028473487 @default.
• W3206783273 cites W2036224456 @default.
• W3206783273 cites W2046674522 @default.
• W3206783273 cites W2051174547 @default.
• W3206783273 cites W2054887632 @default.
• W3206783273 cites W2061548680 @default.
• W3206783273 cites W2068775169 @default.
• W3206783273 cites W2075320162 @default.
• W3206783273 cites W2082546985 @default.
• W3206783273 cites W2104208480 @default.
• W3206783273 cites W2106678197 @default.
• W3206783273 cites W2107956797 @default.
• W3206783273 cites W2110083059 @default.
• W3206783273 cites W2117787165 @default.
• W3206783273 cites W2119396945 @default.
• W3206783273 cites W2133351051 @default.
• W3206783273 cites W2134770471 @default.
• W3206783273 cites W2144351983 @default.
• W3206783273 cites W2152708421 @default.
• W3206783273 cites W2153698685 @default.
• W3206783273 cites W2160177274 @default.
• W3206783273 cites W2164154943 @default.
• W3206783273 cites W2168540512 @default.
• W3206783273 cites W2169398877 @default.
• W3206783273 cites W2175075742 @default.
• W3206783273 cites W2195724570 @default.
• W3206783273 cites W2337011385 @default.
• W3206783273 cites W2472644875 @default.
• W3206783273 cites W2784476961 @default.
• W3206783273 cites W2804476515 @default.
• W3206783273 cites W2886292387 @default.
• W3206783273 cites W2929203080 @default.
• W3206783273 cites W2985743103 @default.
• W3206783273 cites W2999504395 @default.
• W3206783273 cites W3013839139 @default.
• W3206783273 cites W3022708748 @default.
• W3206783273 cites W3088636586 @default.
• W3206783273 cites W3090958279 @default.
• W3206783273 cites W958219903 @default.
• W3206783273 doi "https://doi.org/10.3390/insects12100938" @default.
• W3206783273 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/8537375" @default.
• W3206783273 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34680707" @default.
• W3206783273 hasPublicationYear "2021" @default.
• W3206783273 type Work @default.
• W3206783273 sameAs 3206783273 @default.
• W3206783273 citedByCount "6" @default.
• W3206783273 countsByYear W32067832732022 @default.
• W3206783273 countsByYear W32067832732023 @default.
• W3206783273 crossrefType "journal-article" @default.
• W3206783273 hasAuthorship W3206783273A5021069675 @default.
• W3206783273 hasAuthorship W3206783273A5032482127 @default.
• W3206783273 hasAuthorship W3206783273A5040449741 @default.
• W3206783273 hasAuthorship W3206783273A5044355775 @default.
• W3206783273 hasAuthorship W3206783273A5066898909 @default.
• W3206783273 hasAuthorship W3206783273A5072727640 @default.
• W3206783273 hasBestOaLocation W32067832731 @default.
• W3206783273 hasConcept C104317684 @default.
• W3206783273 hasConcept C141231307 @default.
• W3206783273 hasConcept C150194340 @default.
• W3206783273 hasConcept C162317418 @default.
• W3206783273 hasConcept C180754005 @default.
• W3206783273 hasConcept C18949551 @default.
• W3206783273 hasConcept C22508944 @default.
• W3206783273 hasConcept C2776992364 @default.
• W3206783273 hasConcept C2780663613 @default.
• W3206783273 hasConcept C54355233 @default.
• W3206783273 hasConcept C59582021 @default.
• W3206783273 hasConcept C59822182 @default.
• W3206783273 hasConcept C61320498 @default.
• W3206783273 hasConcept C86803240 @default.
• W3206783273 hasConceptScore W3206783273C104317684 @default.
• W3206783273 hasConceptScore W3206783273C141231307 @default.
• W3206783273 hasConceptScore W3206783273C150194340 @default.
• W3206783273 hasConceptScore W3206783273C162317418 @default.
• W3206783273 hasConceptScore W3206783273C180754005 @default.
• W3206783273 hasConceptScore W3206783273C18949551 @default.
• W3206783273 hasConceptScore W3206783273C22508944 @default.
• W3206783273 hasConceptScore W3206783273C2776992364 @default.
• W3206783273 hasConceptScore W3206783273C2780663613 @default.
• W3206783273 hasConceptScore W3206783273C54355233 @default.
• W3206783273 hasConceptScore W3206783273C59582021 @default.
• W3206783273 hasConceptScore W3206783273C59822182 @default.
• W3206783273 hasConceptScore W3206783273C61320498 @default.
• W3206783273 hasConceptScore W3206783273C86803240 @default.

• next