Matches in SemOpenAlex for { <https://semopenalex.org/work/W3208141723> ?p ?o ?g. }
Showing items 1 to 89 of
89
with 100 items per page.
- W3208141723 endingPage "289" @default.
- W3208141723 startingPage "259" @default.
- W3208141723 abstract "The MetaFlux software supports creating, executing, and solving quantitative metabolic flux models using flux balance analysis (FBA). MetaFlux offers four modes of operation: (1) solving mode executes an FBA model for an individual organism or for an organism community, (2) gene knockout mode executes an FBA model with one or many gene knockouts, (3) development mode assists the user in creating and improving FBA models, and (4) flux variability analysis mode generates a report of the robustness of an FBA model. MetaFlux also solves dynamic FBA (dFBA) for both individual organisms and communities of organisms. MetaFlux can be used in two different environments: on your local computer, which requires the installation of the Pathway Tools software, or through the web, which does not require installation of Pathway Tools. On your local computer, MetaFlux offers all four modes of operation, whereas the web environment provides only the solving mode.Several visualization tools are available to analyze model solutions. The Cellular Overview tool graphically shows the reaction fluxes on an organism's metabolic map once a model is solved. The Omics Dashboard provides a hierarchical approach to visualizing reaction fluxes, organized by metabolic subsystems. For a community of organisms, plotting of accumulated biomasses and metabolites can be performed using the Gnuplot tool.In this chapter, we present eight methods using MetaFlux. Five solving mode methods illustrate execution of models for individual organisms and for organism communities. One method illustrates the gene knockout mode. Two methods for the development mode illustrate steps for developing new metabolic models." @default.
- W3208141723 created "2021-11-08" @default.
- W3208141723 creator A5050296347 @default.
- W3208141723 creator A5053894822 @default.
- W3208141723 creator A5082071104 @default.
- W3208141723 date "2021-10-31" @default.
- W3208141723 modified "2023-10-17" @default.
- W3208141723 title "Metabolic Modeling with MetaFlux" @default.
- W3208141723 cites W2048596643 @default.
- W3208141723 cites W2076262841 @default.
- W3208141723 cites W2096097217 @default.
- W3208141723 cites W2164111097 @default.
- W3208141723 cites W2762019694 @default.
- W3208141723 cites W2767088268 @default.
- W3208141723 cites W2794727335 @default.
- W3208141723 cites W2809336338 @default.
- W3208141723 cites W4236875018 @default.
- W3208141723 doi "https://doi.org/10.1007/978-1-0716-1585-0_12" @default.
- W3208141723 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/34718999" @default.
- W3208141723 hasPublicationYear "2021" @default.
- W3208141723 type Work @default.
- W3208141723 sameAs 3208141723 @default.
- W3208141723 citedByCount "4" @default.
- W3208141723 countsByYear W32081417232022 @default.
- W3208141723 countsByYear W32081417232023 @default.
- W3208141723 crossrefType "book-chapter" @default.
- W3208141723 hasAuthorship W3208141723A5050296347 @default.
- W3208141723 hasAuthorship W3208141723A5053894822 @default.
- W3208141723 hasAuthorship W3208141723A5082071104 @default.
- W3208141723 hasConcept C104317684 @default.
- W3208141723 hasConcept C107457646 @default.
- W3208141723 hasConcept C115903868 @default.
- W3208141723 hasConcept C120314980 @default.
- W3208141723 hasConcept C124101348 @default.
- W3208141723 hasConcept C137858568 @default.
- W3208141723 hasConcept C167091322 @default.
- W3208141723 hasConcept C178790620 @default.
- W3208141723 hasConcept C185592680 @default.
- W3208141723 hasConcept C19843653 @default.
- W3208141723 hasConcept C199360897 @default.
- W3208141723 hasConcept C2777904410 @default.
- W3208141723 hasConcept C36464697 @default.
- W3208141723 hasConcept C41008148 @default.
- W3208141723 hasConcept C48677424 @default.
- W3208141723 hasConcept C54355233 @default.
- W3208141723 hasConcept C63479239 @default.
- W3208141723 hasConcept C68709404 @default.
- W3208141723 hasConcept C70721500 @default.
- W3208141723 hasConcept C86803240 @default.
- W3208141723 hasConceptScore W3208141723C104317684 @default.
- W3208141723 hasConceptScore W3208141723C107457646 @default.
- W3208141723 hasConceptScore W3208141723C115903868 @default.
- W3208141723 hasConceptScore W3208141723C120314980 @default.
- W3208141723 hasConceptScore W3208141723C124101348 @default.
- W3208141723 hasConceptScore W3208141723C137858568 @default.
- W3208141723 hasConceptScore W3208141723C167091322 @default.
- W3208141723 hasConceptScore W3208141723C178790620 @default.
- W3208141723 hasConceptScore W3208141723C185592680 @default.
- W3208141723 hasConceptScore W3208141723C19843653 @default.
- W3208141723 hasConceptScore W3208141723C199360897 @default.
- W3208141723 hasConceptScore W3208141723C2777904410 @default.
- W3208141723 hasConceptScore W3208141723C36464697 @default.
- W3208141723 hasConceptScore W3208141723C41008148 @default.
- W3208141723 hasConceptScore W3208141723C48677424 @default.
- W3208141723 hasConceptScore W3208141723C54355233 @default.
- W3208141723 hasConceptScore W3208141723C63479239 @default.
- W3208141723 hasConceptScore W3208141723C68709404 @default.
- W3208141723 hasConceptScore W3208141723C70721500 @default.
- W3208141723 hasConceptScore W3208141723C86803240 @default.
- W3208141723 hasLocation W32081417231 @default.
- W3208141723 hasLocation W32081417232 @default.
- W3208141723 hasOpenAccess W3208141723 @default.
- W3208141723 hasPrimaryLocation W32081417231 @default.
- W3208141723 hasRelatedWork W1503530970 @default.
- W3208141723 hasRelatedWork W1973973036 @default.
- W3208141723 hasRelatedWork W1989106863 @default.
- W3208141723 hasRelatedWork W2003390994 @default.
- W3208141723 hasRelatedWork W2009393298 @default.
- W3208141723 hasRelatedWork W2064439148 @default.
- W3208141723 hasRelatedWork W2122274843 @default.
- W3208141723 hasRelatedWork W2561920654 @default.
- W3208141723 hasRelatedWork W2573984017 @default.
- W3208141723 hasRelatedWork W4320710124 @default.
- W3208141723 isParatext "false" @default.
- W3208141723 isRetracted "false" @default.
- W3208141723 magId "3208141723" @default.
- W3208141723 workType "book-chapter" @default.