Matches in SemOpenAlex for { <https://semopenalex.org/work/W3212013423> ?p ?o ?g. }
Showing items 1 to 82 of
82
with 100 items per page.
- W3212013423 abstract "Many genomics applications requires the calculation of nucleotide coverage of a reference or counting how many reads maps in a reference region. Here we present BamToCov, a suite of tools for rapid and flexible coverage calculations relying on a memory efficient algorithm and designed for flexible integration in bespoke pipelines. The tools of the suite will process sorted BAM or CRAM files, allowing to extract coverage information using different filtering approaches. BamToCov tools, unlike existing tools already available, have been developed to require a minimum amount of memory, to be easily integrated in workflows, and to allow for strand-specific coverage analyses. The unique coverage calculation algorithm makes it the ideal choice for the analysis of long reads alignments. The programs and their documentation are freely available at https://github.com/telatin/bamtocov." @default.
- W3212013423 created "2021-11-22" @default.
- W3212013423 creator A5015285575 @default.
- W3212013423 creator A5090617021 @default.
- W3212013423 date "2021-11-17" @default.
- W3212013423 modified "2023-10-16" @default.
- W3212013423 title "BamToCov: an efficient toolkit for sequence coverage calculations" @default.
- W3212013423 cites W1966711026 @default.
- W3212013423 cites W2108234281 @default.
- W3212013423 cites W2128505445 @default.
- W3212013423 cites W2136430672 @default.
- W3212013423 cites W2765745983 @default.
- W3212013423 cites W2950006249 @default.
- W3212013423 cites W2951541096 @default.
- W3212013423 cites W3009342154 @default.
- W3212013423 cites W3131443014 @default.
- W3212013423 cites W3135330087 @default.
- W3212013423 doi "https://doi.org/10.1101/2021.11.12.466787" @default.
- W3212013423 hasPublicationYear "2021" @default.
- W3212013423 type Work @default.
- W3212013423 sameAs 3212013423 @default.
- W3212013423 citedByCount "0" @default.
- W3212013423 crossrefType "posted-content" @default.
- W3212013423 hasAuthorship W3212013423A5015285575 @default.
- W3212013423 hasAuthorship W3212013423A5090617021 @default.
- W3212013423 hasBestOaLocation W32120134231 @default.
- W3212013423 hasConcept C111472728 @default.
- W3212013423 hasConcept C124101348 @default.
- W3212013423 hasConcept C138885662 @default.
- W3212013423 hasConcept C166957645 @default.
- W3212013423 hasConcept C177212765 @default.
- W3212013423 hasConcept C17744445 @default.
- W3212013423 hasConcept C199360897 @default.
- W3212013423 hasConcept C199539241 @default.
- W3212013423 hasConcept C2776639384 @default.
- W3212013423 hasConcept C2778112365 @default.
- W3212013423 hasConcept C41008148 @default.
- W3212013423 hasConcept C44210515 @default.
- W3212013423 hasConcept C54355233 @default.
- W3212013423 hasConcept C56666940 @default.
- W3212013423 hasConcept C77088390 @default.
- W3212013423 hasConcept C79581498 @default.
- W3212013423 hasConcept C86803240 @default.
- W3212013423 hasConcept C95457728 @default.
- W3212013423 hasConcept C98045186 @default.
- W3212013423 hasConceptScore W3212013423C111472728 @default.
- W3212013423 hasConceptScore W3212013423C124101348 @default.
- W3212013423 hasConceptScore W3212013423C138885662 @default.
- W3212013423 hasConceptScore W3212013423C166957645 @default.
- W3212013423 hasConceptScore W3212013423C177212765 @default.
- W3212013423 hasConceptScore W3212013423C17744445 @default.
- W3212013423 hasConceptScore W3212013423C199360897 @default.
- W3212013423 hasConceptScore W3212013423C199539241 @default.
- W3212013423 hasConceptScore W3212013423C2776639384 @default.
- W3212013423 hasConceptScore W3212013423C2778112365 @default.
- W3212013423 hasConceptScore W3212013423C41008148 @default.
- W3212013423 hasConceptScore W3212013423C44210515 @default.
- W3212013423 hasConceptScore W3212013423C54355233 @default.
- W3212013423 hasConceptScore W3212013423C56666940 @default.
- W3212013423 hasConceptScore W3212013423C77088390 @default.
- W3212013423 hasConceptScore W3212013423C79581498 @default.
- W3212013423 hasConceptScore W3212013423C86803240 @default.
- W3212013423 hasConceptScore W3212013423C95457728 @default.
- W3212013423 hasConceptScore W3212013423C98045186 @default.
- W3212013423 hasLocation W32120134231 @default.
- W3212013423 hasLocation W32120134232 @default.
- W3212013423 hasOpenAccess W3212013423 @default.
- W3212013423 hasPrimaryLocation W32120134231 @default.
- W3212013423 hasRelatedWork W1530026816 @default.
- W3212013423 hasRelatedWork W2157030199 @default.
- W3212013423 hasRelatedWork W2213210715 @default.
- W3212013423 hasRelatedWork W2360627962 @default.
- W3212013423 hasRelatedWork W2374465232 @default.
- W3212013423 hasRelatedWork W2417320163 @default.
- W3212013423 hasRelatedWork W2924537890 @default.
- W3212013423 hasRelatedWork W3019051080 @default.
- W3212013423 hasRelatedWork W4362639203 @default.
- W3212013423 hasRelatedWork W596584015 @default.
- W3212013423 isParatext "false" @default.
- W3212013423 isRetracted "false" @default.
- W3212013423 magId "3212013423" @default.
- W3212013423 workType "article" @default.